Liyana Azmi

@usim.edu.my

Faculty of Medicine an Health Sciences
Universiti Sains Islam Malaysia



              

https://researchid.co/liyana.azmi

RESEARCH INTERESTS

Microbiology, Structural biology

3

Scopus Publications

170

Scholar Citations

4

Scholar h-index

2

Scholar i10-index

Scopus Publications

  • High-resolution structure of the alcohol dehydrogenase domain of the bifunctional bacterial enzyme AdhE
    Liyana Azmi, Eilis C. Bragginton, Ian T. Cadby, Olwyn Byron, Andrew J. Roe, Andrew L. Lovering, and Mads Gabrielsen

    International Union of Crystallography (IUCr)
    The bifunctional alcohol/aldehyde dehydrogenase (AdhE) comprises both an N-terminal aldehyde dehydrogenase (AldDH) and a C-terminal alcohol dehydrogenase (ADH). In vivo, full-length AdhE oligomerizes into long oligomers known as spirosomes. However, structural analysis of AdhE is challenging owing to the heterogeneity of the spirosomes. Therefore, the domains of AdhE are best characterized separately. Here, the structure of ADH from the pathogenic Escherichia coli O157:H7 was determined to 1.65 Å resolution. The dimeric crystal structure was confirmed in solution by small-angle X-ray scattering.

  • Aldehyde-alcohol dehydrogenase forms a high-order spirosome architecture critical for its activity
    Gijeong Kim, Liyana Azmi, Seongmin Jang, Taeyang Jung, Hans Hebert, Andrew J. Roe, Olwyn Byron, and Ji-Joon Song

    Springer Science and Business Media LLC
    AbstractAldehyde-alcohol dehydrogenase (AdhE) is a key enzyme in bacterial fermentation, converting acetyl-CoA to ethanol, via two consecutive catalytic reactions. Here, we present a 3.5 Å resolution cryo-EM structure of full-length AdhE revealing a high-order spirosome architecture. The structure shows that the aldehyde dehydrogenase (ALDH) and alcohol dehydrogenase (ADH) active sites reside at the outer surface and the inner surface of the spirosome respectively, thus topologically separating these two activities. Furthermore, mutations disrupting the helical structure abrogate enzymatic activity, implying that formation of the spirosome structure is critical for AdhE activity. In addition, we show that this spirosome structure undergoes conformational change in the presence of cofactors. This work presents the atomic resolution structure of AdhE and suggests that the high-order helical structure regulates its enzymatic activity.

  • Calicivirus VP2 forms a portal-like assembly following receptor engagement
    Michaela J. Conley, Marion McElwee, Liyana Azmi, Mads Gabrielsen, Olwyn Byron, Ian G. Goodfellow, and David Bhella

    Springer Science and Business Media LLC

RECENT SCHOLAR PUBLICATIONS

  • Unravelling the link between SARS-CoV-2 mutation frequencies, patient comorbidities, and structural dynamics
    A Azzeri, NA Mohamed, SH Wan Rosli, MN Abdul Samat, ZZ Rashid, ...
    Plos one 19 (3), e0291892 2024

  • Antimicrobial Activity of Eel Mucus: A Review
    NA Azaldin, L Azmi, MAM Jamali, INA Ismail
    Malaysian Journal of Science Health & Technology 9 (2), 164-173 2023

  • Physical parameters influence the microbial quality of indoor air in research laboratories: A report from Malaysia
    K Yogeswaran, L Azmi, S Bhassu, HN Isa, MA Aziz
    Kuwait Journal of Science 50 (4), 665-673 2023

  • IMPACT OF RAPID VACCINATION ON SARS-COV-2 GENOMIC DIVERSITY: AN INTERVENTION TO MINIMISE THE PUBLIC BURDEN OF THE PANDEMIC
    A Azzeri, S Mat-Sharani, A Danish, L Kumareahsan, INA Ismail, ...
    Malaysian Journal of Public Health Medicine 23 (2), 151-159 2023

  • Effect of circadian rhythm disturbance on the human musculoskeletal system and the importance of nutritional strategies
    N Juliana, L Azmi, NM Effendy, NI Mohd Fahmi Teng, IF Abu, ...
    Nutrients 15 (3), 734 2023

  • Molecular evolution and structural analyses of spike protein COVID-19 variants in Negeri Sembilan of peninsular Malaysia
    S Mat-Sharani, D A/L Kumareahsan, INA Ismail, MA Mohamad Jamali, ...
    bioRxiv, 2022.12. 15.520679 2022

  • 5th USIM International Health Conference 2022, Lessons from pandemic: Reshaping Medicine and Healthcare
    AWBA Asnawi, N Roslan, L Azmi, AN Mazian
    Malaysian Journal of Public Health Medicine 22 (Suppl. 2) 2022

  • Jangkitan Semula Covid-19 Semakin Meningkat
    U Malaysia, NA Mohamed, NL Azmi
    Universiti Sains Islam Malaysia 2022

  • Re-Infeksi Covid-19; Adakah Kita Sudah Bersedia
    NA Mohamed, NL Azmi
    Universiti Sains Islam Malaysia 2022

  • 8th National Health Seminar Digital Health: Stepping into The Future of Medicine
    MA Masri, RF Jailani, L Azmi
    Malaysian Journal of Public Health Medicine 22 (Suppl. 1) 2022

  • Molecular evolution and structural analyses of spike protein COVID-19 variants in Negeri Sembilan of peninsular Malaysia (preprint)
    L Azmi, S Mat-Sharani, A Danish, L Kumareahsan, INA Ismail, ...
    2022

  • Jujukan Genom Kenal Pasti Varian Bahaya Covid-19
    U Malaysia, NA Mohamed, L Azmi
    Universiti Sains Islam Malaysian 2021

  • Perlukah Dos Vaksin Ketiga
    U Malaysia, NA Mohamed, L Azmi
    Universiti Sains Islam Malaysian 2021

  • What is the difference between VOI & VOC?
    L Azmi
    What is the difference between VOI & VOC? 2021

  • The Upshot Of Covid-19 On Malaysian Research
    HN Isa, L Azmi
    Universiti Sains Islam Malaysia 2020

  • High-resolution structure of the alcohol dehydrogenase domain of the bifunctional bacterial enzyme AdhE
    L Azmi, EC Bragginton, IT Cadby, O Byron, AJ Roe, AL Lovering, ...
    Acta Crystallographica Section F: Structural Biology Communications 76 (9 2020

  • Bridging science and religion–treatment of depressed Muslim patients using Islamic Integrated Cognitive Behavioural Therapy
    SNAM Yusoff, A Raudhah, NA Zulkifli, L Azmi
    Malaysian Journal of Science Health & Technology 6 2020

  • The Annals of Biomedical Engineering on Critical Size Bone Defect: A Review
    A Ahmad Zainol Had, L Azmi, AR Abdullah
    Malaysian Journal of Science Health & Technology 2020

  • Aldehyde-alcohol dehydrogenase forms a high-order spirosome architecture critical for its activity
    G Kim, L Azmi, S Jang, T Jung, H Hebert, AJ Roe, O Byron, JJ Song
    Nature Communications 10 (1), 4527 2019

  • Calicivirus VP2 forms a portal-like assembly following receptor engagement
    MJ Conley, M McElwee, L Azmi, M Gabrielsen, O Byron, IG Goodfellow, ...
    Nature 565 (7739), 377-381 2019

MOST CITED SCHOLAR PUBLICATIONS

  • Calicivirus VP2 forms a portal-like assembly following receptor engagement
    MJ Conley, M McElwee, L Azmi, M Gabrielsen, O Byron, IG Goodfellow, ...
    Nature 565 (7739), 377-381 2019
    Citations: 118

  • Aldehyde-alcohol dehydrogenase forms a high-order spirosome architecture critical for its activity
    G Kim, L Azmi, S Jang, T Jung, H Hebert, AJ Roe, O Byron, JJ Song
    Nature Communications 10 (1), 4527 2019
    Citations: 34

  • Effect of circadian rhythm disturbance on the human musculoskeletal system and the importance of nutritional strategies
    N Juliana, L Azmi, NM Effendy, NI Mohd Fahmi Teng, IF Abu, ...
    Nutrients 15 (3), 734 2023
    Citations: 7

  • Bridging science and religion–treatment of depressed Muslim patients using Islamic Integrated Cognitive Behavioural Therapy
    SNAM Yusoff, A Raudhah, NA Zulkifli, L Azmi
    Malaysian Journal of Science Health & Technology 6 2020
    Citations: 4

  • Calicivirus VP2 forms a portal to mediate endosome escape
    M Conley, M McElwee, L Azmi, M Gabrielsen, O Byron, IG Goodfellow, ...
    BioRxiv, 397901 2018
    Citations: 3

  • Physical parameters influence the microbial quality of indoor air in research laboratories: A report from Malaysia
    K Yogeswaran, L Azmi, S Bhassu, HN Isa, MA Aziz
    Kuwait Journal of Science 50 (4), 665-673 2023
    Citations: 2

  • 8th National Health Seminar Digital Health: Stepping into The Future of Medicine
    MA Masri, RF Jailani, L Azmi
    Malaysian Journal of Public Health Medicine 22 (Suppl. 1) 2022
    Citations: 1

  • High-resolution structure of the alcohol dehydrogenase domain of the bifunctional bacterial enzyme AdhE
    L Azmi, EC Bragginton, IT Cadby, O Byron, AJ Roe, AL Lovering, ...
    Acta Crystallographica Section F: Structural Biology Communications 76 (9 2020
    Citations: 1