Mohamed Omar Taqi Aboubakr

@arc.sci.eg

Central Laboratory for Agricultural Climate
Agricultural Research Center



                    

https://researchid.co/s7moabou

EDUCATION

2015 – 2019 Ph.D. of Agriculture Science. Thesis title: Transcription Factors mediated oxidative stress response in Bovine Follicular Cells and Preimplantation Embryos
Institute of Animal Science, Faculty of Agriculture, University of Bonn, Bonn, Germany


2007 – 2012 Master of Agriculture Science. Thesis title: Milk Productivity and Physiological parameters of Egyptian Buffalo under climatic conditions of Giza and Qena Governorates
Faculty of Agriculture, Cairo University, Giza, Egypt


2000 – 2004 Bachelor of Agriculture Science (Animal Production)
Faculty of Agriculture, Cairo University, Giza, Egypt

RESEARCH, TEACHING, or OTHER INTERESTS

Agricultural and Biological Sciences, Animal Science and Zoology, Biochemistry, Genetics and Molecular Biology, Aquatic Science

8

Scopus Publications

171

Scholar Citations

7

Scholar h-index

4

Scholar i10-index

Scopus Publications

  • Spatiotemporal expression pattern of miR-205, miR-26a-5p, miR-17-5p, let-7b-5p, and their target genes during different stages of corpus luteum in Egyptian buffaloes
    Sally Ibrahim, Mohamed O. Taqi, A.S.A. Sosa, Al-Shimaa Al-H.H. El-Naby, Karima Gh.M. Mahmoud, Hassan R.H. Darwish, Amal R. Abd El Hameed, and M.F. Nawito

    Elsevier BV

  • Extracellular vesicles in low volume uterine lavage and serum: novel and promising biomarker for endometritis in Arabian mares
    Sally Ibrahim, Mohamed Hedia, Mohamed O. Taqi, Mohamed K. Derbala, Karima Gh. M. Mahmoud, Youssef Ahmed, A. S. Sosa, Yasser H. A. Saber, M. H. Hasanain, M. F. Nawito,et al.

    Springer Science and Business Media LLC
    AbstractBackgroundExtracellular vesicles (EVs) are a promising biomarker and play a vital role in cell–cell communication. This study aimed (I) to identify and characterize EVs from low volume uterine lavage (LVL) and serum in mares with endometritis, compared to healthy controls and (II) to measure serum levels of interleukin 6 (IL-6), and prostaglandins (PGF2αand PGE2). Mares were divided into 30 sub-fertile (endometritis) and 20 fertile (controls). Serum and LVL was collected for EV isolation, and determination of serum levels of inflammatory mediators. Characterization and visualization of EVs were done by electron microscopy, dynamic light scattering and flow cytometry.ResultsSerial ultracentrifugation of LVL and use of a commercial kit for serum were strategies for EVs isolation. Mares with endometritis released higher amounts of larger size EVs. The EVs from mares with endometritis differentially expressed CD9 and CD63, compared to controls. Mares suffering from endometritis evoked higher levels of inflammatory mediators.ConclusionsThus, EVs could be used for a better understanding the regulatory mechanisms associated with developing endometritis in mares.

  • NRF2-mediated signaling is a master regulator of transcription factors in bovine granulosa cells under oxidative stress condition
    Mohamed Omar Taqi, Mohammed Saeed-Zidane, Samuel Gebremedhn, Dessie Salilew-Wondim, Ernst Tholen, Christiane Neuhoff, Michael Hoelker, Karl Schellander, and Dawit Tesfaye

    Springer Science and Business Media LLC
    AbstractTranscription factors (TFs) are known to be involved in regulating the expression of several classes of genes during folliculogenesis. However, the regulatory role of TFs during oxidative stress (OS) is not fully understood. The current study was aimed to investigate the regulation of the TFs in bovine granulosa cells (bGCs) during exposure to OS induced by H2O2in vitro. For this, bGCs derived from ovarian follicles were cultured in vitro till their confluency and then treated with H2O2for 40 min. Twenty-four hours later, cells were subjected to various phenotypic and gene expression analyses for genes related to TFs, endoplasmic reticulum stress, apoptosis, cell proliferation, and differentiation markers. The bGCs exhibited higher reactive oxygen species accumulation, DNA fragmentation, and endoplasmic reticulum stress accompanied by reduction of mitochondrial activity after exposure to OS. In addition, higher lipid accumulation and lower cell proliferation were noticed in H2O2-challenged cells. The mRNA level of TFs includingNRF2,E2F1,KLF6,KLF9,FOS,SREBF1,SREBF2, andNOTCH1was increased in H2O2-treated cells compared with non-treated controls. However, the expression level ofKLF4and its downstream gene,CCNB1, were downregulated in the H2O2-challenged group. Moreover, targeted inhibition ofNRF2using small interference RNA resulted in reduced expression ofKLF9,FOS,SREBF2, andNOTCH1genes, while the expression ofKLF4was upregulated. Taken together, bovine granulosa cells exposed to OS exhibited differential expression of various transcription factors, which are mediated by the NRF2 signaling pathway.

  • Alterations in the expression profile of serum mir-155, mir-223, mir-17, mir-200a, mir-205, as well as levels of interleukin 6, and prostaglandins during endometritis in arabian mares
    Sally Ibrahim, Mohamed Hedia, Mohamed O. Taqi, Mohamed K. Derbala, Karima Gh. M. Mahmoud, Youssef Ahmed, Sayed Ismail, and Mohamed El-Belely

    MDPI AG
    So far the intimate link between serum microRNA (miRNA) and uterine inflammation in mares is unknown. We aimed (I) to investigate expression profile of eca-miR-155, eca-miR-223, eca-miR-17, eca-miR-200a, and eca-miR-205 (II) and to measure concentrations of interleukin 6 (IL-6), and prostaglandins (PGF2α and PGE2) in serum of mares with healthy and abnormal uterine status (endometritis). This study was conducted on 80 Arabian mares: young (4–7 years), and old (8–14 years). Mares were divided into 48 sub-fertile (endometritis) and 32 fertile (control) at stud farms. Serum was collected for measuring IL-6, PGF2α, and PGE2, as well as miRNA isolation and qRT-PCR. Concentrations of IL-6, PGE2, and PGF2α were higher in mares with endometritis compared to control. Age of mares had a remarkable effect on IL-6, PGE2, and PGF2α concentrations. Relative abundance of eca-miR-155, eca-miR-223, eca-miR-17, eca-miR-200a, and eca-miR-205 was higher in both young and old mares with endometritis. We noticed that eca-miR-155, eca-miR-223, eca-miR-200a, and eca-miR-205 revealed higher expression level in old than young mares with endometritis. This is the first study that has revealed the changes in cell free miRNA and serum inflammatory mediators during endometritis, and these findings could be used for a better understanding the pathophysiology mechanisms of endometritis in equine.

  • Combined supplementation of nano‐zinc oxide and thyme oil improves the nutrient digestibility and reproductive fertility in the male californian rabbits
    Ahmed A. A. Abdel-Wareth, Mohammed Ali Al-Kahtani, Khalid Mushabab Alsyaad, Fatma Mohsen Shalaby, Islam M. Saadeldin, Fahdah Ayed Alshammari, Muhammad Mobashar, Mohamed H. A. Suleiman, Abdalla H. H. Ali, Mohamed O. Taqi,et al.

    MDPI AG
    The present study aimed to determine the effects of zinc oxide nanoparticles (ZnO-NPs), thyme oil (THO), or their combination on the nutrient digestibility coefficients, reproductive parameters, and some blood metabolites of male Californian rabbits. One hundred rabbits, 29-weeks of age (initial body weight 3.48 ± 0.08 kg) were randomly distributed into four groups, 25 rabbits each. Treatment groups were fed a control diet, a control diet supplemented with ZnO-NPs (100 mg/kg), THO (500 mg/kg), or combination of ZnO-NPs (100 mg/kg) and THO (500 mg/kg). The feeding trial lasted for 35 days. Results showed improvements in dry matter, crude protein, ether extract, and crude fiber in ZnO-NPs, THO, and their combination treated groups compared to those of control. Furthermore, semen volume, sperm motility, vitality, and morphology were significantly improved (p < 0.01) in ZnO-NPs and THO groups rather than the control. Both ZnO-NPs and THO, as either individual or combined treatments significantly improved the serum alanine amino-transferase (ALT), aspartate amino-transferase (AST), urea, and creatinine compared to the control. Moreover, serum concentrations of testosterone were significantly increased in rabbits supplemented with ZnO-NPs, THO, or their combination compared to those of control (p < 0.05). In conclusion, ZnO-NPs, THO, or their combination improved the digestibility of nutrients, liver/ kidney functions, semen characteristics, and testosterone concentration in male rabbits.

  • Sexual dimorphic expression and release of transcription factors in bovine embryos exposed to oxidative stress
    Mohamed O. Taqi, Mohammed Saeed‐Zidane, Samuel Gebremedhn, Dessie Salilew‐Wondim, Omar Khdrawy, Franca Rings, Christiane Neuhoff, Michael Hoelker, Karl Schellander, and Dawit Tesfaye

    Wiley
    AbstractSexually dimorphic differences in genome activity, which is orchestrated by transcription factors (TFs), could explain the differential response of male and female embryos to environmental stressors. To proof this hypothesis, the expression of cellular and extracellular TFs was investigated in male and female bovine embryos in vitro cultured either under low (5%) or high (20%) oxygen levels. The intracellular reactive oxygen species (ROS), total cell number, expression of nuclear factor (erythroid‐derived 2) factor 2 (NFE2L2), Krüppel‐like factor 4 (KLF4), notch receptor 1 (NOTCH1), E2F transcription factor 1 (E2F1), and SREBF2 along with extracellular vesicles (EVs) biogenesis genes were assessed at the blastocyst stage and their released EVs. Low blastocyst rate in both sexes due to oxidative stress (OS) was accompanied by increased ROS accumulation and reduced cell number in female embryos. The messenger RNA and protein levels of NFE2L2, as well as KLF4 expression, were higher in male embryos exposed to OS compared with female embryos. However, the expression of NOTCH1 and E2F1 was higher in female embryos cultured in high oxygen level. Male embryos exposed to OS released more EVs enriched with NFE2L2, superoxide dismutase 1, and NOTCH1 accompanied by elevated expression of EVs biogenesis genes. Accordingly, differential expression of TFs and their release into spent media could partially explain the sexual dimorphic response of bovine embryos to environmental stresses.

  • Endogenous and exogenous modulation of Nrf2 mediated oxidative stress response in bovine granulosa cells: Potential implication for ovarian function
    Omar Khadrawy, Samuel Gebremedhn, Dessie Salilew-Wondim, Mohamed Taqi, Christiane Neuhoff, Ernst Tholen, Michael Hoelker, Karl Schellander, and Dawit Tesfaye

    MDPI AG
    Nrf2 is a redox sensitive transcription factor regulating the expression of antioxidant genes as defense mechanism against various stressors. The aim of this study is to investigate the potential role of noncoding miRNAs as endogenous and quercetin as exogenous regulators of Nrf2 pathway in bovine granulosa cells. For this cultured granulosa cells were used for modulation of miRNAs (miR-28, 153 and miR-708) targeting the bovine Nrf2 and supplementation of quercentin to investigate the regulatory mechanisms of the Nrf2 antioxidant system. Moreover, cultured cells were treated with hydrogen peroxide to induce oxidative stress in those cells. Our results showed that, oxidative stress activated the expression of Nrf2 as a defense mechanism, while suppressing the expression of those miRNAs. Overexpression of those miRNAs resulted in downregulation of Nrf2 expression resulted in higher ROS accumulation, reduced mitochondrial activity and cellular proliferation. Quercetin supplementation showed its protective role against oxidative stress induced by H2O2 by inducing the expression of antioxidant enzymes. In conclusion, this study highlighted the involvement of miR-153, miR-28 and miR-708 in regulatory network of Nrf2 mediated antioxidant system in bovine granulosa cells function. Furthermore, quercetin at a low dose played a protective role in bovine granulosa cells against oxidative stress damage.

  • Monitoring and description of annual accumulative growing degree days changes in Nile Delta governorates


RECENT SCHOLAR PUBLICATIONS

  • Spatiotemporal expression pattern of miR-205, miR-26a-5p, miR-17-5p, let-7b-5p, and their target genes during different stages of corpus luteum in Egyptian buffaloes
    S Ibrahim, MO Taqi, ASA Sosa, ASAHH El-Naby, KGM Mahmoud, ...
    Journal of Genetic Engineering and Biotechnology 20 (1), 37 2022

  • Extracellular vesicles in low volume uterine lavage and serum: novel and promising biomarker for endometritis in Arabian mares
    S Ibrahim, M Hedia, MO Taqi, MK Derbala, KGM Mahmoud, Y Ahmed, ...
    BMC Veterinary Research 18 (1), 42 2022

  • NRF2-mediated signaling is a master regulator of transcription factors in bovine granulosa cells under oxidative stress condition
    MO Taqi, M Saeed-Zidane, S Gebremedhn, D Salilew-Wondim, E Tholen, ...
    Cell and Tissue Research 385, 769-783 2021

  • Alterations in the Expression Profile of Serum miR-155, miR-223, miR-17, miR-200a, miR-205, as well as Levels of Interleukin 6, and Prostaglandins during Endometritis in
    S Ibrahim, M Hedia, MO Taqi, MK Derbala, KGM Mahmoud, Y Ahmed, ...
    Veterinary Sciences 8 (6), 98 2021

  • Serum miR-155, miR-223, miR-17, miR-200a, miR-205, Interleukin 6, and Prostaglandins as Novel Diagnostic Markers for Endometritis in Arabian Mares
    S Ibrahim, M Hedia, MO Taqi, MK Derbala, Y Ahmed, S Ismail, M El-Belely
    2021

  • Combined supplementation of nano-zinc oxide and thyme oil improves the nutrient digestibility and reproductive fertility in the male Californian rabbits
    AAA Abdel-Wareth, MA Al-Kahtani, KM Alsyaad, FM Shalaby, ...
    Animals 10 (12), 2234 2020

  • Sexual dimorphic expression and release of transcription factors in bovine embryos exposed to oxidative stress
    MO Taqi, M Saeed‐Zidane, S Gebremedhn, D Salilew‐Wondim, ...
    Molecular Reproduction and Development 86 (12), 2005-2019 2019

  • Water and Feed Consumption and Body Weight of Egyptian Buffaloes and Cows under Different Regional Climatic Conditions in Egypt.
    FI Omran, TA Fooda, MO Taqi
    Journal of Animal & Poultry Production 10 (8) 2019

  • Endogenous and exogenous modulation of Nrf2 mediated oxidative stress response in bovine granulosa cells: potential implication for ovarian function
    O Khadrawy, S Gebremedhn, D Salilew-Wondim, MO Taqi, C Neuhoff, ...
    International journal of molecular sciences 20 (7), 1635 2019

  • 178 Cellular and extracellular expression of stress response transcription factors in male and female bovine pre-implantation embryos under oxidative stress conditions
    MO Taqi, S Gebremedhn, D Salilew-Wondim, F Rings, C Neuhoff, ...
    Reproduction, Fertility and Development 31 (1), 213-214 2019

  • Impact of urbanization on agricultural land losses and climate change Case study: Gharbiah Governorate, Egypt
    M Hassanein, M Fahim, A Khalil, S Abolmaty, K Refaie, M Taqi, ...
    J. Am. Sci 10 (1), 99-107 2014

  • Monitoring and description of annual accumulative growing degree days changes in Nile Delta governorates
    II Sadek, WMS El-Desokey, MO Taqi, FS Moursy
    Life science journal 11 (6), 655-665 2014

  • Geographical Distribution and Developmental Pattern of Buffalo in Egypt
    MK Hassanein, SM Abolmaaty, AA Khalil, MO Taqi, YH Essa, HH Shawki
    World Rural Observations 5 (4), 14-19 2013

  • The possible impact of climate change and adaptation options on African livestock: A review
    MO Taqi, MK Hassanein, AA Khalil
    Researcher 5 (12), 139-145 2013

  • Efficiency differential of government and non-government assisted rice farms: A case study of Kwara State, Nigeria
    OE Ayinde, OE Akanbi, OA Omotesho, B Yousefi, S Boroomannasab, ...
    World Rural Observations 4 (3), 1-13 2012

  • Utilization of satellite imagery for drought monitoring in Egypt
    MA Abdrabbo, AA Farag, M Abul-Soud, MM El-Mola, FS Moursy, II Sadek, ...
    World Rural Observations 4 (3), 27-37 2012

  • Physiological and hormonal responses of egyptian buffalo to different climatic conditions
    YM Hafez, MO Taki, AA Baiomy, MA Medany, S Abou-Bakr
    Egypt. J. Anim. Prod 48, 61-73 2011

MOST CITED SCHOLAR PUBLICATIONS

  • Endogenous and exogenous modulation of Nrf2 mediated oxidative stress response in bovine granulosa cells: potential implication for ovarian function
    O Khadrawy, S Gebremedhn, D Salilew-Wondim, MO Taqi, C Neuhoff, ...
    International journal of molecular sciences 20 (7), 1635 2019
    Citations: 55

  • Combined supplementation of nano-zinc oxide and thyme oil improves the nutrient digestibility and reproductive fertility in the male Californian rabbits
    AAA Abdel-Wareth, MA Al-Kahtani, KM Alsyaad, FM Shalaby, ...
    Animals 10 (12), 2234 2020
    Citations: 23

  • Utilization of satellite imagery for drought monitoring in Egypt
    MA Abdrabbo, AA Farag, M Abul-Soud, MM El-Mola, FS Moursy, II Sadek, ...
    World Rural Observations 4 (3), 27-37 2012
    Citations: 21

  • Sexual dimorphic expression and release of transcription factors in bovine embryos exposed to oxidative stress
    MO Taqi, M Saeed‐Zidane, S Gebremedhn, D Salilew‐Wondim, ...
    Molecular Reproduction and Development 86 (12), 2005-2019 2019
    Citations: 14

  • NRF2-mediated signaling is a master regulator of transcription factors in bovine granulosa cells under oxidative stress condition
    MO Taqi, M Saeed-Zidane, S Gebremedhn, D Salilew-Wondim, E Tholen, ...
    Cell and Tissue Research 385, 769-783 2021
    Citations: 9

  • Efficiency differential of government and non-government assisted rice farms: A case study of Kwara State, Nigeria
    OE Ayinde, OE Akanbi, OA Omotesho, B Yousefi, S Boroomannasab, ...
    World Rural Observations 4 (3), 1-13 2012
    Citations: 8

  • Alterations in the Expression Profile of Serum miR-155, miR-223, miR-17, miR-200a, miR-205, as well as Levels of Interleukin 6, and Prostaglandins during Endometritis in
    S Ibrahim, M Hedia, MO Taqi, MK Derbala, KGM Mahmoud, Y Ahmed, ...
    Veterinary Sciences 8 (6), 98 2021
    Citations: 7

  • The possible impact of climate change and adaptation options on African livestock: A review
    MO Taqi, MK Hassanein, AA Khalil
    Researcher 5 (12), 139-145 2013
    Citations: 6

  • Extracellular vesicles in low volume uterine lavage and serum: novel and promising biomarker for endometritis in Arabian mares
    S Ibrahim, M Hedia, MO Taqi, MK Derbala, KGM Mahmoud, Y Ahmed, ...
    BMC Veterinary Research 18 (1), 42 2022
    Citations: 5

  • Water and Feed Consumption and Body Weight of Egyptian Buffaloes and Cows under Different Regional Climatic Conditions in Egypt.
    FI Omran, TA Fooda, MO Taqi
    Journal of Animal & Poultry Production 10 (8) 2019
    Citations: 5

  • Impact of urbanization on agricultural land losses and climate change Case study: Gharbiah Governorate, Egypt
    M Hassanein, M Fahim, A Khalil, S Abolmaty, K Refaie, M Taqi, ...
    J. Am. Sci 10 (1), 99-107 2014
    Citations: 5

  • Monitoring and description of annual accumulative growing degree days changes in Nile Delta governorates
    II Sadek, WMS El-Desokey, MO Taqi, FS Moursy
    Life science journal 11 (6), 655-665 2014
    Citations: 4

  • Geographical Distribution and Developmental Pattern of Buffalo in Egypt
    MK Hassanein, SM Abolmaaty, AA Khalil, MO Taqi, YH Essa, HH Shawki
    World Rural Observations 5 (4), 14-19 2013
    Citations: 4

  • Physiological and hormonal responses of egyptian buffalo to different climatic conditions
    YM Hafez, MO Taki, AA Baiomy, MA Medany, S Abou-Bakr
    Egypt. J. Anim. Prod 48, 61-73 2011
    Citations: 3

  • Spatiotemporal expression pattern of miR-205, miR-26a-5p, miR-17-5p, let-7b-5p, and their target genes during different stages of corpus luteum in Egyptian buffaloes
    S Ibrahim, MO Taqi, ASA Sosa, ASAHH El-Naby, KGM Mahmoud, ...
    Journal of Genetic Engineering and Biotechnology 20 (1), 37 2022
    Citations: 2

Publications

• Sadek, I.I., El-Desokey, W.M.S., Taqi, M.O., Moursy F.S. (2014). Monitoring and description of annual accumulative growing degree days changes in Nile Delta governorates. Life science Journal, 11 (6): 655-665
• Hassanein, M. K.; Fahim, M. A.; Khalil, A. A.; Abolmaty, S. M.; Refaie, K. M.; Taqi, M.O. and Abou Hadid, A. F. (2014). Impact of urbanization on agricultural land losses and climate change Case study: Gharbiah Governorate, Egypt. Journal of American Science, 10(1): 99-107
• Taqi, M. O.; Hassanein, M. K.; Khalil, A. A. (2013). The possible impact of climate change and adaptation options on African livestock: A review. Researcher, 5(12): 139-145
• Hassanein, M. K.; Abolmaaty, S. M.; Khalil, A. A.; Taqi, M. O.; Essa, Yassmin H.; and Shawki, H. H. (2013). Geographical Distribution and Developmental Pattern of Buffalo in Egypt. World Rural Observations, 5(4): 17-19
• Abdrabbo M. A.; Farag, A.A.; Abul-Soud, M.; Gad El-Mola Manal, M.H.; Moursy Fatma, S.; Sadek, I. I.; Hashem, F. A.; Taqi, M. O.; El-Desoky, W.M.S. and Shawki, H.H. (2012). Utilization of satellite imagery for drought monitoring in Egypt. World Rural Observations, 4(3): 27-37
• Hafez, Y. M., Taqi, M.O., Baiomy, A.A., Medany, M.A. and Abou-Bakr, S. (2011). Physiological and hormonal responses of Egyptian buffalo to different climatic conditions. Egyptian J. Anim. Prod., 48:61-73

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