Vincenzo Torraca

@kcl.ac.uk

Lecturer in Infectious Disease, Department of Infectious Diseases
King's College London



                                      

https://researchid.co/vincenzo.torraca

I am a Lecturer in Infectious Disease at King's College London and a Fellow of the Higher Education Academy (FHEA). My research focuses on host-pathogen interactions, genomic epidemiology, and antimicrobial resistance for globally relevant bacterial pathogens. In my lab, we use the zebrafish model to recapitulate human infections with a variety of bacteria, including Shigella, E. coli, Salmonella, and Mycobacterium. We are also interested in cell biology and we explore infections as a tool to obtain a better understanding of cell functions in both physiological and pathological contexts. Over the last few years, my work focused on the persistent carriage of enteropathogens and on the development of innovative strategies to counteract Shigella infections.

EDUCATION

I was awarded a Postgraduate Certificate in Learning and Teaching (LSHTM), a PhD in Microbiology and Immunology (Leiden University), a MSc in Molecular and Cellular Biology (Salerno University) and a BSc in Molecular and Computational Biology (Salerno University).

I was previously a Senior Lecturer in Microbiology and Co-Course Leader for BSc (Hons) Medical Sciences at the University of Westminster, an Assistant Professor and Wellcome ISSF Fellow at the London School of Hygiene and Tropical Medicine, a Marie Curie Research Fellow at Imperial College London and a Marie Curie PhD Fellow at Leiden University.

RESEARCH, TEACHING, or OTHER INTERESTS

Infectious Diseases, Immunology and Microbiology, Animal Science and Zoology, Medicine

37

Scopus Publications

1525

Scholar Citations

22

Scholar h-index

25

Scholar i10-index

Scopus Publications

  • ILKAP Promotes the Metastasis of Hepatocellular Carcinoma Cells by Inhibiting β-Catenin Degradation and Enhancing the WNT Signaling Pathway
    Rui Zhang, Jinglei Yuan, Shicheng Liu, Vincenzo Torraca, Zhiquan Liao, Yueyan Wu, Hongfei Tan, Xia Yao, Xueyang Hou, Hao Lyu,et al.

    Wiley
    AbstractThe incidence of Hepatocellular carcinoma (HCC) and HCC‐related deaths have remarkably increased over the recent decades. It has been reported that β‐catenin activation can be frequently observed in HCC cases. This study identified the integrin‐linked kinase‐associated phosphatase (ILKAP) as a novel β‐catenin‐interacting protein. ILKAP is localized both in the nucleus and cytoplasm and regulates the WNT pathway in different ways. First, it is demonstrated that ILKAP activates the WNT pathway in HCC cells by increasing the protein level of β‐catenin and other proteins associated with the WNT signaling, such as c‐Myc and CyclinD1. Next, it is shown that ILKAP promotes the metastasis of HCC both in vitro and in vivo in a zebrafish xenograft model. It is also found that ILKAP dephosphorylates the GSK3β and CK1, contributing to the reduced ubiquitination of β‐catenin. Furthermore, it is identified that ILKAP functions by mediating binding between TCF4 and β‐catenin to enhance expression of WNT target genes. Taken together, the study demonstrates a critical function of ILKAP in metastasis of HCC, since ILKAP is crucial for the activation of the WNT pathway via stabilization of β‐catenin and increased binding between TCF4 and β‐catenin.

  • Transcriptional profiling of zebrafish identifies host factors controlling susceptibility to Shigella flexneri
    Vincenzo Torraca, Richard J. White, Ian M. Sealy, Maria Mazon-Moya, Gina Duggan, Alexandra R. Willis, Elisabeth M. Busch-Nentwich, and Serge Mostowy

    The Company of Biologists
    ABSTRACT Shigella flexneri is a human-adapted pathovar of Escherichia coli that can invade the intestinal epithelium, causing inflammation and bacillary dysentery. Although an important human pathogen, the host response to S. flexneri has not been fully described. Zebrafish larvae represent a valuable model for studying human infections in vivo. Here, we use a Shigella-zebrafish infection model to generate mRNA expression profiles of host response to Shigella infection at the whole-animal level. Immune response-related processes dominate the signature of early Shigella infection (6 h post-infection). Consistent with its clearance from the host, the signature of late Shigella infection (24 h post-infection) is significantly changed, and only a small set of immune-related genes remain differentially expressed, including acod1 and gpr84. Using mutant lines generated by ENU, CRISPR mutagenesis and F0 crispants, we show that acod1- and gpr84-deficient larvae are more susceptible to Shigella infection. Together, these results highlight the power of zebrafish to model infection by bacterial pathogens and reveal the mRNA expression of the early (acutely infected) and late (clearing) host response to Shigella infection.

  • RUNDC1 negatively mediates the fusion of autophagosomes with lysosomes via regulating SNARE complex assembly
    Rui Zhang, Vincenzo Torraca, Hao Lyu, Shuai Xiao, Dong Guo, Cefan Zhou, and Jingfeng Tang

    Informa UK Limited
    Macroautophagy/autophagy is an essential pro-survival mechanism activated in response to nutrient deficiency. The proper fusion between autophagosomes and lysosomes is a critical step for autophagic degradation. We recently reported that RUNDC1 (RUN domain containing 1) inhibits autolysosome formation via clasping the ATG14-STX17-SNAP29 complex to hinder VAMP8 binding. We showed that RUNDC1 colocalizes with LC3 and associates with mature autophagosomes in cell lines and the zebrafish model. We utilized liposome fusion and in vitro autophagosome-lysosome fusion assays to demonstrate that RUNDC1 inhibits autolysosome formation. Moreover, we found that RUNDC1 clasps the ATG14-STX17-SNAP29 complex via stimulating ATG14 homo-oligomerization to inhibit ATG14 dissociation, which in turn prevents VAMP8 from binding to STX17-SNAP29. Our results demonstrate that RUNDC1 is a negative regulator of autophagy that restricts autophagosome fusion with lysosomes and is crucial for zebrafish survival in nutrient-deficient conditions. Here, we summarize our findings and discuss their implications for our understanding of autophagy regulation.

  • Shigella Serotypes Associated With Carriage in Humans Establish Persistent Infection in Zebrafish
    Vincenzo Torraca, Dominik Brokatzky, Sydney L Miles, Charlotte E Chong, P Malaka De Silva, Stephen Baker, Claire Jenkins, Kathryn E Holt, Kate S Baker, and Serge Mostowy

    Oxford University Press (OUP)
    Abstract Shigella represents a paraphyletic group of enteroinvasive Escherichia coli. More than 40 Shigella serotypes have been reported. However, most cases within the men who have sex with men (MSM) community are attributed to 3 serotypes: Shigella sonnei unique serotype and Shigella flexneri 2a and 3a serotypes. Using the zebrafish model, we demonstrate that Shigella can establish persistent infection in vivo. Bacteria are not cleared by the immune system and become antibiotic tolerant. Establishment of persistent infection depends on the O-antigen, a key constituent of the bacterial surface and a serotype determinant. Representative isolates associated with MSM transmission persist in zebrafish, while representative isolates of a serotype not associated with MSM transmission do not. Isolates of a Shigella serotype establishing persistent infections elicited significantly less macrophage death in vivo than isolates of a serotype unable to persist. We conclude that zebrafish are a valuable platform to illuminate factors underlying establishment of Shigella persistent infection in humans.

  • RUNDC1 inhibits autolysosome formation and survival of zebrafish via clasping ATG14-STX17-SNAP29 complex
    Rui Zhang, Yuyan Yang, Chao He, Xin Zhang, Vincenzo Torraca, Shen Wang, Nan Liu, Jiaren Yang, Shicheng Liu, Jinglei Yuan,et al.

    Springer Science and Business Media LLC

  • Zebrafish null mutants of Sept6 and Sept15 are viable but more susceptible to Shigella infection
    Vincenzo Torraca, Magdalena K. Bielecka, Margarida C. Gomes, Dominik Brokatzky, Elisabeth M. Busch‐Nentwich, and Serge Mostowy

    Wiley
    AbstractSeptins are evolutionarily conserved GTP‐binding proteins known for their roles in cell division and host defence against Shigella infection. Although septin group members are viewed to function as hetero‐oligomeric complexes, the role of individual septins within these complexes or in isolation is poorly understood. Decades of work using mouse models has shown that some septins (including SEPT7) are essential for animal development, while others (including SEPT6) are dispensable, suggesting that some septins may compensate for the absence of others. The zebrafish genome encodes 19 septin genes, representing the full complement of septin groups described in mice and humans. In this report, we characterise null mutants for zebrafish Sept6 (a member of the SEPT6 group) and Sept15 (a member of the SEPT7 group) and test their role in zebrafish development and host defence against Shigella infection. We show that null mutants for Sept6 and Sept15 are both viable, and that expression of other zebrafish septins are not significantly affected by their mutation. Consistent with previous reports using knockdown of Sept2, Sept7b, and Sept15, we show that Sept6 and Sept15 are required for host defence against Shigella infection. These results highlight Shigella infection of zebrafish as a powerful system to study the role of individual septins in vivo.

  • Septins promote caspase activity and coordinate mitochondrial apoptosis
    Hoan Van Ngo, Stevens Robertin, Dominik Brokatzky, Magdalena K. Bielecka, Damián Lobato‐Márquez, Vincenzo Torraca, and Serge Mostowy

    Wiley
    AbstractApoptosis is a form of regulated cell death essential for tissue homeostasis and embryonic development. Apoptosis also plays a key role during bacterial infection, yet some intracellular bacterial pathogens (such as Shigella flexneri, whose lipopolysaccharide can block apoptosis) can manipulate cell death programs as an important survival strategy. Septins are a component of the cytoskeleton essential for mitochondrial dynamics and host defense, however, the role of septins in regulated cell death is mostly unknown. Here, we discover that septins promote mitochondrial (i.e., intrinsic) apoptosis in response to treatment with staurosporine (a pan‐kinase inhibitor) or etoposide (a DNA topoisomerase inhibitor). Consistent with a role for septins in mitochondrial dynamics, septins promote the release of mitochondrial protein cytochrome c in apoptotic cells and are required for the proteolytic activation of caspase‐3, caspase‐7, and caspase‐9 (core components of the apoptotic machinery). Apoptosis of HeLa cells induced in response to infection by S. flexneri ΔgalU (a lipopolysaccharide mutant unable to block apoptosis) is also septin‐dependent. In vivo, zebrafish larvae are significantly more susceptible to infection with S. flexneri ΔgalU (as compared to infection with wildtype S. flexneri), yet septin deficient larvae are equally susceptible to infection with S. flexneri ΔgalU and wildtype S. flexneri. These data provide a new molecular framework to understand the complexity of mitochondrial apoptosis and its ability to combat bacterial infection.

  • P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri
    Yang W. Huan, Vincenzo Torraca, Russell Brown, Jidapha Fa-arun, Sydney L. Miles, Diego A. Oyarzún, Serge Mostowy, and Baojun Wang

    American Chemical Society (ACS)
    The discovery of clustered, regularly interspaced, short palindromic repeats (CRISPR) and the Cas9 RNA-guided nuclease provides unprecedented opportunities to selectively kill specific populations or species of bacteria. However, the use of CRISPR-Cas9 to clear bacterial infections in vivo is hampered by the inefficient delivery of cas9 genetic constructs into bacterial cells. Here, we use a broad-host-range P1-derived phagemid to deliver the CRISPR-Cas9 chromosomal-targeting system into Escherichia coli and the dysentery-causing Shigella flexneri to achieve DNA sequence-specific killing of targeted bacterial cells. We show that genetic modification of the helper P1 phage DNA packaging site (pac) significantly enhances the purity of packaged phagemid and improves the Cas9-mediated killing of S. flexneri cells. We further demonstrate that P1 phage particles can deliver chromosomal-targeting cas9 phagemids into S. flexneri in vivo using a zebrafish larvae infection model, where it significantly reduces the bacterial load and promotes host survival. Our study highlights the potential of combining a P1 bacteriophage-based delivery with the CRISPR chromosomal-targeting system to achieve DNA sequence-specific cell lethality and efficient clearance of bacterial infection.

  • Acquisition of a large virulence plasmid (pINV) promoted temperature-dependent virulence and global dispersal of O96:H19 enteroinvasive Escherichia coli
    Sydney L. Miles, Vincenzo Torraca, Zoe A. Dyson, Ana Teresa López-Jiménez, Ebenezer Foster-Nyarko, Damián Lobato-Márquez, Claire Jenkins, Kathryn E. Holt, and Serge Mostowy

    American Society for Microbiology
    ABSTRACT Enteroinvasive Escherichia coli (EIEC) and Shigella are closely related agents of bacillary dysentery. It is widely viewed that EIEC and Shigella species evolved from E. coli via independent acquisitions of a large virulence plasmid (pINV) encoding a type 3 secretion system (T3SS). Sequence Type (ST)99 O96:H19 E. coli is a novel clone of EIEC responsible for recent outbreaks in Europe and South America. Here, we use 92 whole genome sequences to reconstruct a dated phylogeny of ST99 E. coli , revealing distinct phylogenomic clusters of pINV-positive and -negative isolates. To study the impact of pINV acquisition on the virulence of this clone, we developed an EIEC-zebrafish infection model showing that virulence of ST99 EIEC is thermoregulated. Strikingly, zebrafish infection using a T3SS-deficient ST99 EIEC strain and the oldest available pINV-negative isolate reveals a separate, temperature - independent mechanism of virulence, indicating that ST99 non-EIEC strains were virulent before pINV acquisition. Taken together, these results suggest that an already pathogenic E. coli acquired pINV and that virulence of ST99 isolates became thermoregulated once pINV was acquired. IMPORTANCE Enteroinvasive Escherichia coli (EIEC) and Shigella are etiological agents of bacillary dysentery. Sequence Type (ST)99 is a clone of EIEC hypothesized to cause human disease by the recent acquisition of pINV, a large plasmid encoding a type 3 secretion system (T3SS) that confers the ability to invade human cells. Using Bayesian analysis and zebrafish larvae infection, we show that the virulence of ST99 EIEC isolates is highly dependent on temperature, while T3SS-deficient isolates encode a separate temperature-independent mechanism of virulence. These results indicate that ST99 non-EIEC isolates may have been virulent before pINV acquisition and highlight an important role of pINV acquisition in the dispersal of ST99 EIEC in humans, allowing wider dissemination across Europe and South America.

  • Editorial: Zebrafish Models for Human Disease Studies
    Liqing Zang, Vincenzo Torraca, Yasuhito Shimada, and Norihiro Nishimura

    Frontiers Media SA
    Zebrafish are an attractive vertebrate model organism for biomedical discovery (Tavares and Santos Lopes, 2013). The advantages of using zebrafish are well known and include cost-effectiveness, high fecundity, short generation time, external development, transparency of embryonic stages, and ease of genome manipulation. These features have provided investigators with a vertebrate model with unprecedented potential for the live imaging of biological processes (Okuda and Hogan, 2020) and genetic and drug screenings (Shah et al., 2015; Lam and Peterson, 2019). Zebrafish models have been used in developmental biology and embryogenesis (Briggs, 2002; Mathavan et al., 2005). They have been increasingly used to investigate human diseases in the last 2 decades due to the high degree of genetic, anatomical, and physiological similarities to humans (Dooley and Zon, 2000; Adamson et al., 2018). Over 80% of disease-causing human proteins have an orthologue in zebrafish, and the publishing of the zebrafish reference genome in 2013 accelerated disease modelling in this organism. Consequently, our understanding of disease mechanisms and the development of new medical treatments have expanded. Notably, new therapeutic targets and molecules have been identified using zebrafish, which are now being considered for human trials or are awaiting clinical applications. Nevertheless, more zebrafish models are needed to broaden our understanding of human diseases. The current research topic in Frontiers of Cell and Developmental Biology includes 35 original and review articles from 224 authors, containing a wide range of examples on how zebrafish contribute as an animal model to our understanding of various human diseases. The collection encompasses different areas of investigation: as further detailed by the sections below.

  • Editorial: Nucleic Acid-Associated Inflammation
    Nadine Laguette, Christelle Langevin, David Olagnier, Vincenzo Torraca, Claire Vanpouille-Box, and Eloi R. Verrier

    Frontiers Media SA
    1 Institut de Génétique Humaine, CNRS, Université de Montpellier, Molecular Basis of Inflammation Laboratory, Montpellier, France, 2 Université Paris-Saclay, INRAE, IERP UE0907, Jouy-en-Josas, France, 3 Department of Biomedicine, Aarhus University, Aarhus, Denmark, 4 Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, United Kingdom, 5 Department of Radiation Oncology, Weill Cornell Medical College, New York, NY, United States, 6 Sandra and Edward Meyer Cancer Center, New York, NY, United States, 7 Université de Strasbourg, Inserm, Institut de Recherche sur les Maladies Virales et Hepatiques UMR_S1110, Strasbourg, France

  • Disruption of Cxcr3 chemotactic signaling alters lysosomal function and renders macrophages more microbicidal
    Frida Sommer, Vincenzo Torraca, Yufei Xie, Aliede E. in ‘t Veld, Joost Willemse, and Annemarie H. Meijer

    Elsevier BV

  • In vivo biomolecular imaging of zebrafish embryos using confocal Raman spectroscopy
    Håkon Høgset, Conor C. Horgan, James P. K. Armstrong, Mads S. Bergholt, Vincenzo Torraca, Qu Chen, Timothy J. Keane, Laurence Bugeon, Margaret J. Dallman, Serge Mostowy,et al.

    Springer Science and Business Media LLC
    AbstractZebrafish embryos provide a unique opportunity to visualize complex biological processes, yet conventional imaging modalities are unable to access intricate biomolecular information without compromising the integrity of the embryos. Here, we report the use of confocal Raman spectroscopic imaging for the visualization and multivariate analysis of biomolecular information extracted from unlabeled zebrafish embryos. We outline broad applications of this method in: (i) visualizing the biomolecular distribution of whole embryos in three dimensions, (ii) resolving anatomical features at subcellular spatial resolution, (iii) biomolecular profiling and discrimination of wild type and ΔRD1 mutant Mycobacterium marinum strains in a zebrafish embryo model of tuberculosis and (iv) in vivo temporal monitoring of the wound response in living zebrafish embryos. Overall, this study demonstrates the application of confocal Raman spectroscopic imaging for the comparative bimolecular analysis of fully intact and living zebrafish embryos.

  • Shigella sonnei
    Vincenzo Torraca, Kathryn Holt, and Serge Mostowy

    Elsevier BV

  • Deficiency in the autophagy modulator Dram1 exacerbates pyroptotic cell death of Mycobacteria-infected macrophages
    Rui Zhang, Monica Varela, Gabriel Forn-Cuní, Vincenzo Torraca, Michiel van der Vaart, and Annemarie H. Meijer

    Springer Science and Business Media LLC
    AbstractDNA damage regulated autophagy modulator 1 (DRAM1) is a stress-inducible regulator of autophagy and cell death. DRAM1 has been implicated in cancer, myocardial infarction, and infectious diseases, but the molecular and cellular functions of this transmembrane protein remain poorly understood. Previously, we have proposed DRAM1 as a host resistance factor for tuberculosis (TB) and a potential target for host-directed anti-infective therapies. In this study, we generated a zebrafish dram1 mutant and investigated its loss-of-function effects during Mycobacterium marinum (Mm) infection, a widely used model in TB research. In agreement with previous knockdown analysis, dram1 mutation increased the susceptibility of zebrafish larvae to Mm infection. RNA sequencing revealed major effects of Dram1 deficiency on metabolic, immune response, and cell death pathways during Mm infection, and only minor effects on proteinase and metabolic pathways were found under uninfected conditions. Furthermore, unchallenged dram1 mutants did not display overt autophagic defects, but autophagic targeting of Mm was reduced in the absence of Dram1. The phagocytic ability of macrophages in dram1 mutants was unaffected, but acidification of Mm-containing vesicles was strongly reduced, indicating that Dram1 is required for phagosome maturation. By in vivo imaging, we observed that Dram1-deficient macrophages fail to restrict Mm during early stages of infection. The resulting increase in bacterial burden could be reverted by knockdown of inflammatory caspase a (caspa) and gasdermin Eb (gsdmeb), demonstrating pyroptosis as the mechanism underlying premature cell death of Mm-infected macrophages in dram1 mutants. Collectively, these data demonstrate that dissemination of mycobacterial infection in zebrafish larvae is promoted in the absence of Dram1 due to reduced maturation of mycobacteria-containing vesicles, failed intracellular containment, and consequent pyroptotic death of infected macrophages. These results provide new evidence that Dram1 plays a central role in host resistance to intracellular infection, acting at the crossroad of autophagy and cell death.

  • Chemokine Receptors and Phagocyte Biology in Zebrafish
    Frida Sommer, Vincenzo Torraca, and Annemarie H. Meijer

    Frontiers Media SA
    Phagocytes are highly motile immune cells that ingest and clear microbial invaders, harmful substances, and dying cells. Their function is critically dependent on the expression of chemokine receptors, a class of G-protein-coupled receptors (GPCRs). Chemokine receptors coordinate the recruitment of phagocytes and other immune cells to sites of infection and damage, modulate inflammatory and wound healing responses, and direct cell differentiation, proliferation, and polarization. Besides, a structurally diverse group of atypical chemokine receptors (ACKRs) are unable to signal in G-protein-dependent fashion themselves but can shape chemokine gradients by fine-tuning the activity of conventional chemokine receptors. The optically transparent zebrafish embryos and larvae provide a powerful in vivo system to visualize phagocytes during development and study them as key elements of the immune response in real-time. In this review, we discuss how the zebrafish model has furthered our understanding of the role of two main classes of chemokine receptors, the CC and CXC subtypes, in phagocyte biology. We address the roles of the receptors in the migratory properties of phagocytes in zebrafish models for cancer, infectious disease, and inflammation. We illustrate how studies in zebrafish enable visualizing the contribution of chemokine receptors and ACKRs in shaping self-generated chemokine gradients of migrating cells. Taking the functional antagonism between two paralogs of the CXCR3 family as an example, we discuss how the duplication of chemokine receptor genes in zebrafish poses challenges, but also provides opportunities to study sub-functionalization or loss-of-function events. We emphasize how the zebrafish model has been instrumental to prove that the major determinant for the functional outcome of a chemokine receptor-ligand interaction is the cell-type expressing the receptor. Finally, we highlight relevant homologies and analogies between mammalian and zebrafish phagocyte function and discuss the potential of zebrafish models to further advance our understanding of chemokine receptors in innate immunity and disease.

  • Analysis tools to quantify dissemination of pathology in zebrafish larvae
    David R. Stirling, Oniz Suleyman, Eliza Gil, Philip M. Elks, Vincenzo Torraca, Mahdad Noursadeghi, and Gillian S. Tomlinson

    Springer Science and Business Media LLC
    AbstractWe describe new open source software called QuantiFish for rapid quantitation of fluorescent foci in zebrafish larvae, to support infection research in this animal model. QuantiFish extends the conventional measurements of bacterial load and number of bacterial foci to include measures for dissemination of infection. These are represented by the proportions of bacteria between foci and their spatial distribution. We showcase these measures by comparison of intravenous and hindbrain routes of Mycobacterium marinum infection, which are indistinguishable by measurement of bacterial load and not consistently differentiated by the number of bacterial foci. The intravenous route showed dose dependent dissemination of infection, reflected by increased spatial dispersion of bacteria and lower proportions of bacteria distributed across many foci. In contrast, hindbrain infection resulted in localised disease, limited to a smaller area and higher proportions of bacteria distributed across fewer foci. The application of QuantiFish may extend beyond models of infection, to study other pathologies such as metastatic cancer.

  • Frontline Science: Antagonism between regular and atypical Cxcr3 receptors regulates macrophage migration during infection and injury in zebrafish
    Frida Sommer, Vincenzo Torraca, Sarah M. Kamel, Amber Lombardi, and Annemarie H. Meijer

    Oxford University Press (OUP)
    Abstract The CXCR3-CXCL11 chemokine-signaling axis plays an essential role in infection and inflammation by orchestrating leukocyte trafficking in human and animal models, including zebrafish. Atypical chemokine receptors (ACKRs) play a fundamental regulatory function in signaling networks by shaping chemokine gradients through their ligand scavenging function, while being unable to signal in the classic G-protein-dependent manner. Two copies of the CXCR3 gene in zebrafish, cxcr3.2 and cxcr3.3, are expressed on macrophages and share a highly conserved ligand-binding site. However, Cxcr3.3 has structural characteristics of ACKRs indicative of a ligand-scavenging role. In contrast, we previously showed that Cxcr3.2 is an active CXCR3 receptor because it is required for macrophage motility and recruitment to sites of mycobacterial infection. In this study, we generated a cxcr3.3 CRISPR-mutant to functionally dissect the antagonistic interplay among the cxcr3 paralogs in the immune response. We observed that cxcr3.3 mutants are more susceptible to mycobacterial infection, whereas cxcr3.2 mutants are more resistant. Furthermore, macrophages in the cxcr3.3 mutant are more motile, show higher activation status, and are recruited more efficiently to sites of infection or injury. Our results suggest that Cxcr3.3 is an ACKR that regulates the activity of Cxcr3.2 by scavenging common ligands and that silencing the scavenging function of Cxcr3.3 results in an exacerbated Cxcr3.2 signaling. In human, splice variants of CXCR3 have antagonistic functions and CXCR3 ligands also interact with ACKRs. Therefore, in zebrafish, an analogous regulatory mechanism appears to have evolved after the cxcr3 gene duplication event, through diversification of conventional and atypical receptor variants.

  • Corrigendum: RNAseq Profiling of Leukocyte Populations in Zebrafish Larvae Reveals a cxcl11 Chemokine Gene as a Marker of Macrophage Polarization During Mycobacterial Infection (Frontiers in Immunology, (2019), 10, 10.3389/fimmu.2019.00832)
    Julien Rougeot, Vincenzo Torraca, Ania Zakrzewska, Zakia Kanwal, Hans J. Jansen, Frida Sommer, Herman P. Spaink, and Annemarie H. Meijer

    Frontiers Media SA
    [This corrects the article DOI: 10.3389/fimmu.2019.00832.].

  • CXCR4 signaling regulates metastatic onset by controlling neutrophil motility and response to malignant cells
    C. Tulotta, C. Stefanescu, Q. Chen, V. Torraca, A. H. Meijer, and B. E. Snaar-Jagalska

    Springer Science and Business Media LLC
    AbstractDeveloping tumors interact with the surrounding microenvironment. Myeloid cells exert both anti- and pro-tumor functions and chemokines are known to drive immune cell migration towards cancer cells. It is documented that CXCR4 signaling supports tumor metastasis formation in tissues where CXCL12, its cognate ligand, is abundant. On the other hand, the role of the neutrophilic CXCR4 signaling in driving cancer invasion and metastasis formation is poorly understood. Here, we use the zebrafish xenotransplantation model to study the role of CXCR4 signaling in driving the interaction between invasive human tumor cells and host neutrophils, supporting early metastasis formation. We found that zebrafish cxcr4 (cxcr4b) is highly expressed in neutrophils and experimental micrometastases fail to form in mutant larvae lacking a functional Cxcr4b. We demonstrated that Cxcr4b controls neutrophil number and motility and showed that Cxcr4b transcriptomic signature relates to motility and adhesion regulation in neutrophils in tumor-naïve larvae. Finally, Cxcr4b deficient neutrophils failed to interact with cancer cells initiating early metastatic events. In conclusion, we propose that CXCR4 signaling supports the interaction between tumor cells and host neutrophils in developing tumor metastases. Therefore, targeting CXCR4 on tumor cells and neutrophils could serve as a double bladed razor to limit cancer progression.

  • Shigella sonnei o-antigen inhibits internalization, vacuole escape, and inflammasome activation
    Jayne L. Watson, Julia Sanchez-Garrido, Philippa J. Goddard, Vincenzo Torraca, Serge Mostowy, Avinash R. Shenoy, and Abigail Clements

    American Society for Microbiology
    Diarrheal disease remains the second leading cause of death in children under five. Shigella remains a significant cause of diarrheal disease with two species, S. flexneri and S. sonnei , causing the majority of infections. S. flexneri are well known to cause cell death in macrophages, which contributes to the inflammatory nature of Shigella diarrhea. Here, we demonstrate that S. sonnei causes less cell death than S. flexneri due to a reduced number of bacteria present in the cell cytosol. We identify the O-Ag polysaccharide which, uniquely among Shigella spp., is present in two forms on the bacterial cell surface as the bacterial factor responsible. Our data indicate that S. sonnei differs from S. flexneri in key aspects of infection and that more attention should be given to characterization of S. sonnei infection.

  • Meeting report: Zebrafish Infection and Immunity 2019
    Vincenzo Torraca, Margarida C. Gomes, Milka Sarris, and Serge Mostowy

    Springer Science and Business Media LLC

  • Macrophages target Salmonella by Lc3-associated phagocytosis in a systemic infection model
    Samrah Masud, Tomasz K. Prajsnar, Vincenzo Torraca, Gerda E.M. Lamers, Marianne Benning, Michiel Van Der Vaart, and Annemarie H. Meijer

    Informa UK Limited
    ABSTRACT Innate immune defense against intracellular pathogens, like Salmonella, relies heavily on the autophagy machinery of the host. This response is studied intensively in epithelial cells, the target of Salmonella during gastrointestinal infections. However, little is known of the role that autophagy plays in macrophages, the predominant carriers of this pathogen during systemic disease. Here we utilize a zebrafish embryo model to study the interaction of S. enterica serovar Typhimurium with the macroautophagy/autophagy machinery of macrophages in vivo. We show that phagocytosis of live but not heat-killed Salmonella triggers recruitment of the autophagy marker GFP-Lc3 in a variety of patterns labeling tight or spacious bacteria-containing compartments, also revealed by electron microscopy. Neutrophils display similar GFP-Lc3 associations, but genetic modulation of the neutrophil/macrophage balance and ablation experiments show that macrophages are critical for the defense response. Deficiency of atg5 reduces GFP-Lc3 recruitment and impairs host resistance, in contrast to atg13 deficiency, indicating that Lc3-Salmonella association at this stage is independent of the autophagy preinitiation complex and that macrophages target Salmonella by Lc3-associated phagocytosis (LAP). In agreement, GFP-Lc3 recruitment and host resistance are impaired by deficiency of Rubcn/Rubicon, known as a negative regulator of canonical autophagy and an inducer of LAP. We also found strict dependency on NADPH oxidase, another essential factor for LAP. Both Rubcn and NADPH oxidase are required to activate a Salmonella biosensor for reactive oxygen species inside infected macrophages. These results identify LAP as the major host protective autophagy-related pathway responsible for macrophage defense against Salmonella during systemic infection. Abbreviations: ATG: autophagy related gene; BECN1: Beclin 1; CFU: colony forming units; CYBA/P22PHOX: cytochrome b-245, alpha chain; CYBB/NOX2: cytochrome b-245 beta chain; dpf: days post fertilization; EGFP: enhanced green fluorescent protein; GFP: green fluorescent protein; hfp: hours post fertilization; hpi: hours post infection; IRF8: interferon regulatory factor 8; Lcp1/L-plastin: lymphocyte cytosolic protein 1; LAP: LC3-associated phagocytosis; MAP1LC3/LC3: microtubule-associated protein 1A/1B-light chain 3; mCherry: red fluorescent protein; mpeg1: macrophage expressed gene 1; mpx: myeloid specific peroxidase; NADPH oxidase: nicotinamide adenine dinucleotide phosphate oxidase; NCF4/P40PHOX: neutrophil cytosolic factor 4; NTR-mCherry: nitroreductase-mCherry fusion; PTU: phenylthiourea; PtdIns3K: class III phosphatidylinositol 3-kinase; PtdIns3P: phosphatidylinositol 3-phosphate; RB1CC1/FIP200: RB-1 inducible coiled coin 1; ROS: reactive oxygen species; RT-PCR: reverse transcriptase polymerase chain reaction; RUBCN/RUBICON: RUN and cysteine rich domain containing BECN1-interacting protein; SCV: Salmonella-containing vacuole; S. Typhimurium/S.T: Salmonella enterica serovar Typhimurium; TEM: transmission electron microscopy; Tg: transgenic; TSA: tyramide signal amplification; ULK1/2: unc-51-like autophagy activating kinase 1/2; UVRAG: UVRAG: UV radiation resistance associated; wt: wild type

  • Shigella sonnei infection of zebrafish reveals that O-antigen mediates neutrophil tolerance and dysentery incidence
    Vincenzo Torraca, Myrsini Kaforou, Jayne Watson, Gina M. Duggan, Hazel Guerrero-Gutierrez, Sina Krokowski, Michael Hollinshead, Thomas B. Clarke, Rafal J. Mostowy, Gillian S. Tomlinson,et al.

    Public Library of Science (PLoS)

  • RNAseq profiling of leukocyte populations in zebrafish larvae reveals a cxcl11 chemokine gene as a marker of macrophage polarization during mycobacterial infection
    Julien Rougeot, Vincenzo Torraca, Ania Zakrzewska, Zakia Kanwal, Hans J. Jansen, Frida Sommer, Herman P. Spaink, and Annemarie H. Meijer

    Frontiers Media SA
    Macrophages are phagocytic cells from the innate immune system, which forms the first line of host defense against invading pathogens. These highly dynamic immune cells can adopt specific functional phenotypes, with the pro-inflammatory M1 and anti-inflammatory M2 polarization states as the two extremes. Recently, the process of macrophage polarization during inflammation has been visualized by real time imaging in larvae of the zebrafish. This model organism has also become widely used to study macrophage responses to microbial pathogens. To support the increasing use of zebrafish in macrophage biology, we set out to determine the complete transcriptome of zebrafish larval macrophages. We studied the specificity of the macrophage signature compared with other larval immune cells and the macrophage-specific expression changes upon infection. We made use of the well-established mpeg1, mpx, and lck fluorescent reporter lines to sort and sequence the transcriptome of larval macrophages, neutrophils, and lymphoid progenitor cells, respectively. Our results provide a complete dataset of genes expressed in these different immune cell types and highlight their similarities and differences. Major differences between the macrophage and neutrophil signatures were found within the families of proteinases. Furthermore, expression of genes involved in antigen presentation and processing was specifically detected in macrophages, while lymphoid progenitors showed expression of genes involved in macrophage activation. Comparison with datasets of in vitro polarized human macrophages revealed that zebrafish macrophages express a strongly homologous gene set, comprising both M1 and M2 markers. Furthermore, transcriptome analysis of low numbers of macrophages infected by the intracellular pathogen Mycobacterium marinum revealed that infected macrophages change their transcriptomic response by downregulation of M2-associated genes and overexpression of specific M1-associated genes. Among the infection-induced genes, a homolog of the human CXCL11 chemokine gene, cxcl11aa, stood out as the most strongly overexpressed M1 marker. Upregulation of cxcl11aa in Mycobacterium-infected macrophages was found to require the function of Myd88, a critical adaptor molecule in the Toll-like and interleukin 1 receptor pathways that are central to pathogen recognition and activation of the innate immune response. Altogether, our data provide a valuable data mining resource to support infection and inflammation research in the zebrafish model.

RECENT SCHOLAR PUBLICATIONS

  • ILKAP Promotes the Metastasis of Hepatocellular Carcinoma Cells by Inhibiting β‐Catenin Degradation and Enhancing the WNT Signaling Pathway
    R Zhang, J Yuan, S Liu, V Torraca, Z Liao, Y Wu, H Tan, X Yao, X Hou, ...
    Advanced biology, 2300117 2024

  • RUNDC1 negatively mediates the fusion of autophagosomes with lysosomes via regulating SNARE complex assembly
    R Zhang, V Torraca, H Lyu, S Xiao, D Guo, C Zhou, J Tang
    Autophagy 20 (2), 454-456 2024

  • First person–Vincenzo Torraca
    V Torraca
    Disease Models and Mechanisms 17 (1) 2024

  • Transcriptional profiling of zebrafish identifies host factors controlling susceptibility to Shigella flexneri
    V Torraca, RJ White, IM Sealy, M Mazon-Moya, G Duggan, AR Willis, ...
    Disease models & mechanisms 17 (1) 2024

  • RUNDC1 inhibits autolysosome formation and survival of zebrafish via clasping ATG14-STX17-SNAP29 complex
    R Zhang, Y Yang, C He, X Zhang, V Torraca, S Wang, N Liu, J Yang, S Liu, ...
    Cell Death & Differentiation 30 (10), 2231-2248 2023

  • Acquisition of a large virulence plasmid (pINV) promoted temperature-dependent virulence and global dispersal of O96:H19 enteroinvasive Escherichia coli
    SL Miles, V Torraca, ZA Dyson, AT Lpez-Jimnez, E Foster-Nyarko, ...
    Mbio 14 (4), e00882-23 2023

  • Zebrafish null mutants of Sept6 and Sept15 are viable but more susceptible to Shigella infection
    V Torraca, MK Bielecka, MC Gomes, D Brokatzky, EM Busch‐Nentwich, ...
    Cytoskeleton 80 (7-8), 266-274 2023

  • Septins promote caspase activity and coordinate mitochondrial apoptosis
    H Van Ngo, S Robertin, D Brokatzky, MK Bielecka, D Lobato‐Mrquez, ...
    Cytoskeleton 80 (7-8), 254-265 2023

  • P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri
    YW Huan, V Torraca, R Brown, J Fa-Arun, SL Miles, DA Oyarzn, ...
    ACS synthetic biology 12 (3), 709-721 2023

  • MAJOR ARTICLE Shigella serotypes associated with carriage in humans establish persistent infection in zebrafish
    V Torraca, D Brokatzky, SL Miles, CE Chong, PM De Silva, S Baker, ...
    2023

  • Zebrafish Models for Human Disease Studies
    L Zang, V Torraca, Y Shimada, N Nishimura
    Frontiers in Cell and Developmental Biology 10, 861941 2022

  • Nucleic Acid-Associated Inflammation
    N Laguette, C Langevin, D Olagnier, V Torraca, C Vanpouille-Box, ...
    Frontiers in immunology 12, 791580 2021

  • Disruption of Cxcr3 chemotactic signaling alters lysosomal function and renders macrophages more microbicidal
    F Sommer, V Torraca, Y Xie, J Willemse, AH Meijer
    Cell reports 35 (2) 2021

  • In vivo biomolecular imaging of zebrafish embryos using confocal Raman spectroscopy
    H Hgset, CC Horgan, JPK Armstrong, MS Bergholt, V Torraca, Q Chen, ...
    Nature Communications 11 (1), 6172 2020

  • Shigella sonnei
    V Torraca, K Holt, S Mostowy
    Trends in microbiology 28 (8), 696-697 2020

  • Deficiency in the autophagy modulator Dram1 exacerbates pyroptotic cell death of Mycobacteria-infected macrophages
    R Zhang, M Varela, G Forn-Cun, V Torraca, M van der Vaart, AH Meijer
    Cell death & disease 11 (4), 277 2020

  • Chemokine receptors and phagocyte biology in zebrafish
    F Sommer, V Torraca, AH Meijer
    Frontiers in immunology 11, 516639 2020

  • Analysis tools to quantify dissemination of pathology in zebrafish larvae
    DR Stirling, O Suleyman, E Gil, PM Elks, V Torraca, M Noursadeghi, ...
    Scientific reports 10 (1), 3149 2020

  • Frontline Science: Antagonism between regular and atypical Cxcr3 receptors regulates macrophage migration during infection and injury in zebrafish
    F Sommer, V Torraca, SM Kamel, A Lombardi, AH Meijer
    Journal of leukocyte biology 107 (2), 185-203 2020

  • 1General introduction: Chemokine receptors and phagocyte
    F Sommer, AH Meijer, V Torraca
    Chemokine signaling mechanisms underlying inflammation and infection control 2020

MOST CITED SCHOLAR PUBLICATIONS

  • Macrophage-pathogen interactions in infectious diseases: new therapeutic insights from the zebrafish host model
    V Torraca, S Masud, HP Spaink, AH Meijer
    Disease models & mechanisms 7 (7), 785-797 2014
    Citations: 178

  • Zebrafish infection: from pathogenesis to cell biology
    V Torraca, S Mostowy
    Trends in cell biology 28 (2), 143-156 2018
    Citations: 157

  • The CXCR3-CXCL11 signaling axis mediates macrophage recruitment and dissemination of mycobacterial infection
    V Torraca, C Cui, R Boland, JP Bebelman, AM Van Der Sar, MJ Smit, ...
    Disease models & mechanisms 8 (3), 253-269 2015
    Citations: 140

  • Robotic injection of zebrafish embryos for high-throughput screening in disease models
    HP Spaink, C Cui, MI Wiweger, HJ Jansen, WJ Veneman, R Marn-Juez, ...
    Methods 62 (3), 246-254 2013
    Citations: 116

  • Ultra-small graphene oxide functionalized with polyethylenimine (PEI) for very efficient gene delivery in cell and zebrafish embryos
    X Zhou, F Laroche, GEM Lamers, V Torraca, P Voskamp, T Lu, F Chu, ...
    Nano Research 5, 703-709 2012
    Citations: 89

  • Macrophages target Salmonella by Lc3-associated phagocytosis in a systemic infection model
    S Masud, TK Prajsnar, V Torraca, GEM Lamers, M Benning, ...
    Autophagy 15 (5), 796-812 2019
    Citations: 86

  • RNAseq profiling of leukocyte populations in zebrafish larvae reveals a cxcl11 chemokine gene as a marker of macrophage polarization during mycobacterial infection
    J Rougeot, V Torraca, A Zakrzewska, Z Kanwal, HJ Jansen, F Sommer, ...
    Frontiers in immunology 10, 443723 2019
    Citations: 78

  • CXCR4 signaling regulates metastatic onset by controlling neutrophil motility and response to malignant cells
    C Tulotta, C Stefanescu, Q Chen, V Torraca, AH Meijer, ...
    Scientific reports 9 (1), 2399 2019
    Citations: 62

  • Modeling infectious diseases in the context of a developing immune system
    S Masud, V Torraca, AH Meijer
    Current topics in developmental biology 124, 277-329 2017
    Citations: 62

  • Septins restrict inflammation and protect zebrafish larvae from Shigella infection
    MJ Mazon-Moya, AR Willis, V Torraca, L Boucontet, AR Shenoy, ...
    PLoS pathogens 13 (6), e1006467 2017
    Citations: 57

  • Septins and bacterial infection
    V Torraca, S Mostowy
    Frontiers in cell and developmental biology 4, 127 2016
    Citations: 47

  • In vivo biomolecular imaging of zebrafish embryos using confocal Raman spectroscopy
    H Hgset, CC Horgan, JPK Armstrong, MS Bergholt, V Torraca, Q Chen, ...
    Nature Communications 11 (1), 6172 2020
    Citations: 44

  • Deficiency in the autophagy modulator Dram1 exacerbates pyroptotic cell death of Mycobacteria-infected macrophages
    R Zhang, M Varela, G Forn-Cun, V Torraca, M van der Vaart, AH Meijer
    Cell death & disease 11 (4), 277 2020
    Citations: 42

  • The inflammatory chemokine Cxcl18b exerts neutrophil-specific chemotaxis via the promiscuous chemokine receptor Cxcr2 in zebrafish
    V Torraca, NA Otto, A Tavakoli-Tameh, AH Meijer
    Developmental & Comparative Immunology 67, 57-65 2017
    Citations: 42

  • Chemokine receptors and phagocyte biology in zebrafish
    F Sommer, V Torraca, AH Meijer
    Frontiers in immunology 11, 516639 2020
    Citations: 41

  • Frontline Science: Antagonism between regular and atypical Cxcr3 receptors regulates macrophage migration during infection and injury in zebrafish
    F Sommer, V Torraca, SM Kamel, A Lombardi, AH Meijer
    Journal of leukocyte biology 107 (2), 185-203 2020
    Citations: 36

  • Shigella sonnei
    V Torraca, K Holt, S Mostowy
    Trends in microbiology 28 (8), 696-697 2020
    Citations: 35

  • The chemokine receptor CXCR4 promotes granuloma formation by sustaining a mycobacteria-induced angiogenesis programme
    V Torraca, C Tulotta, BE Snaar-Jagalska, AH Meijer
    Scientific reports 7 (1), 45061 2017
    Citations: 34

  • Shigella-Induced Emergency Granulopoiesis Protects Zebrafish Larvae from Secondary Infection
    AR Willis, V Torraca, MC Gomes, J Shelley, M Mazon-Moya, A Filloux, ...
    MBio 9 (3), 10.1128/mbio. 00933-18 2018
    Citations: 27

  • Shigella sonnei O-Antigen Inhibits Internalization, Vacuole Escape, and Inflammasome Activation
    JL Watson, J Sanchez-Garrido, PJ Goddard, V Torraca, S Mostowy, ...
    MBio 10 (6), 10.1128/mbio. 02654-19 2019
    Citations: 25