Shimaa Abdelazim Abdellatef Abdelaleem

@nims.go.jp

Mechanobiology group
National Institute for Material Science

EDUCATION

PhD Waseda University

RESEARCH, TEACHING, or OTHER INTERESTS

Multidisciplinary, Cell Biology, Biomaterials
15

Scopus Publications

Scopus Publications

  • Microtubules Disruption Alters the Cellular Structures and Mechanics Depending on Underlying Chemical Cues
    Small, 2025
  • Photoactivatable substrates show diverse phenotypes of leader cells in collective migration when moving along different extracellular matrix proteins
    Shimaa A. Abdellatef, Francesca Bard, Jun Nakanishi
    Biomaterials Science, 2024
    Photoactivatable surface enables the sequential deposition of ECM proteins to produce heterogeneous and homogeneous ECM protein-coated surfaces. Leader cells’ phenotypes vary based on the type of protein they migrate on.
  • Mechanistic investigation into selective cytotoxic activities of gold nanoparticles functionalized with epidermal growth factor variants
    Aiwen Zhang, Shimaa A. Abdellatef, Jun Nakanishi
    Analytical Sciences, 2023
  • Photoactivatable surfaces resolve the impact of gravity vector on collective cell migratory characteristics
    Shinya Sakakibara, Shimaa A. Abdellatef, Shota Yamamoto, Masao Kamimura, Jun Nakanishi
    Science and Technology of Advanced Materials, 2023
    Despite considerable interest in the impact of space travel on human health, the influence of the gravity vector on collective cell migration remains unclear. This is primarily because of the difficulty in inducing collective migration, where cell clusters appear in an inverted position against gravity, without cellular damage. In this study, photoactivatable surfaces were used to overcome this challenge. Photoactivatable surfaces enable the formation of geometry-controlled cellular clusters and the remote induction of cellular migration via photoirradiation, thereby maintaining the cells in the inverted position. Substrate inversion preserved the circularity of cellular clusters compared to cells in the normal upright position, with less leader cell appearance. Furthermore, the inversion of cells against the gravity vector resulted in the remodeling of the cytoskeletal system via the strengthening of external actin bundles. Within the 3D cluster architecture, enhanced accumulation of active myosin was observed in the upper cell-cell junction, with a flattened apical surface. Depending on the gravity vector, attenuating actomyosin activity correlates with an increase in the number of leader cells, indicating the importance of cell contractility in collective migration phenotypes and cytoskeletal remodeling.
  • Mapping stress inside living cells by atomic force microscopy in response to environmental stimuli
    Hongxin Wang, Han Zhang, Ryo Tamura, Bo Da, Shimaa A. Abdellatef, et al.
    Science and Technology of Advanced Materials, 2023
    The response of cells to environmental stimuli, under either physiological or pathological conditions, plays a key role in determining cell fate toward either adaptive survival or controlled death. The efficiency of such a feedback mechanism is closely related to the most challenging human diseases, including cancer. Since cellular responses are implemented through physical forces exerted on intracellular components, more detailed knowledge of force distribution through modern imaging techniques is needed to ensure a mechanistic understanding of these forces. In this work, we mapped these intracellular forces at a whole-cell scale and with submicron resolution to correlate intracellular force distribution to the cytoskeletal structures. Furthermore, we visualized dynamic mechanical responses of the cells adapting to environmental modulations in situ. Such task was achieved by using an informatics-assisted atomic force microscope (AFM) indentation technique where a key step was Markov-chain Monte Carlo optimization to search for both the models used to fit indentation force–displacement curves and probe geometry descriptors. We demonstrated force dynamics within cytoskeleton, as well as nucleoskeleton in living cells which were subjected to mechanical state modulation: myosin motor inhibition, micro-compression stimulation and geometrical confinement manipulation. Our results highlight the alteration in the intracellular prestress to attenuate environmental stimuli; to involve in cellular survival against mechanical signal-initiated death during cancer growth and metastasis; and to initiate cell migration.
  • Oscillatory movement of a dynein-microtubule complex crosslinked with DNA origami
    Shimaa A Abdellatef, Hisashi Tadakuma, Kangmin Yan, Takashi Fujiwara, Kodai Fukumoto, et al.
    Elife, 2022
    Bending of cilia and flagella occurs when axonemal dynein molecules on one side of the axoneme produce force and move toward the microtubule (MT) minus end. These dyneins are then pulled back when the axoneme bends in the other direction, meaning oscillatory back and forth movement of dynein during repetitive bending of cilia/flagella. There are various factors that may regulate the dynein activity, e.g. the nexin-dynein regulatory complex, radial spokes, and central apparatus. In order to understand the basic mechanism of dynein’s oscillatory movement, we constructed a simple model system composed of MTs, outer-arm dyneins, and crosslinks between the MTs made of DNA origami. Electron microscopy (EM) showed pairs of parallel MTs crossbridged by patches of regularly arranged dynein molecules bound in two different orientations, depending on which of the MTs their tails bind to. The oppositely oriented dyneins are expected to produce opposing forces when the pair of MTs have the same polarity. Optical trapping experiments showed that the dynein-MT-DNA-origami complex actually oscillates back and forth after photolysis of caged ATP. Intriguingly, the complex, when held at one end, showed repetitive bending motions. The results show that a simple system composed of ensembles of oppositely oriented dyneins, MTs, and inter-MT crosslinkers, without any additional regulatory structures, has an intrinsic ability to cause oscillation and repetitive bending motions.
  • Precise Tuning and Characterization of Viscoelastic Interfaces for the Study of Early Epithelial-Mesenchymal Transition Behaviors
    Alice Chinghsuan Chang, Koichiro Uto, Shimaa A. Abdellatef, Jun Nakanishi
    Langmuir, 2022
    There is growing evidence that cellular functions are regulated by the viscoelastic nature of surrounding matrices. This study aimed to investigate the impact of interfacial viscoelasticity on adhesion and epithelial-mesenchymal transition (EMT) behaviors of epithelial cells. The interfacial viscoelasticity was manipulated using spin-coated thin films composed of copolymers of ε-caprolactone and d,l-lactide photo-cross-linked with benzophenone, whose mechanical properties were characterized using atomic force microscopy and a rheometer. The critical range for the morphological transition of epithelial Madin-Darby canine kidney (MDCK) cells was of the order of 102 ms relaxation time, which was 1-2 orders of magnitude smaller than the relaxation times reported (10-102 s). An analysis of strain rate-dependent viscoelastic properties revealed that the difference was caused by the different strain rate/frequency used for the mechanical characterization of the interface and bulk. Furthermore, decoupling of the interfacial viscous and elastic terms demonstrated that E/N-cadherin expression levels were regulated differently by interfacial relaxation and elasticity. These results confirm the significance of precise manipulation and characterization of interfacial viscoelasticity in mechanobiology studies on EMT progression.
  • Photoactivatable substrates for systematic study of the impact of an extracellular matrix ligand on appearance of leader cells in collective cell migration
    Shimaa A. Abdellatef, Jun Nakanishi
    Biomaterials, 2018
  • Reduced adhesive ligand density in engineered extracellular matrices induces an epithelial-mesenchymal-like transition
    Saw Marlar, Shimaa A. Abdellatef, Jun Nakanishi
    Acta Biomaterialia, 2016
  • Facile preparation of photoactivatable surfaces with tuned substrate adhesiveness
    Yoshihisa Shimizu, Masao Kamimura, Shota Yamamoto, Shimaa A. Abdellatef, Kazuo Yamaguchi, et al.
    Analytical Sciences, 2016
    This paper describes a facile method for the preparation of photoactivatable substrates with tuned surface density of an extracellular matrix peptide to resolve the impacts of biochemical and mechanical cues on collective cell migration. The controllability of surface ligand density was validated by cell adhesion and migration tests, complemented with fluorescence observation of an alternative ligand. Depending on the surface ligand density, HeLa cells either kept or lost collective characteristics. The present materials will be useful to address mechanobiology of collective cell migration.
  • Nanostructures control the hepatocellular responses to a cytotoxic agent "cisplatin"
    Shimaa A. Abdellatef, Riho Tange, Takeshi Sato, Akihiko Ohi, Toshihide Nabatame, et al.
    Biomed Research International, 2015
  • The effect of physical and chemical cues on hepatocellular function and morphology
    Shimaa Abdellatef, Akihiko Ohi, Toshihide Nabatame, Akiyoshi Taniguchi
    International Journal of Molecular Sciences, 2014
  • Induction of hepatocyte functional protein expression by submicron/nano-patterning substrates to mimic in vivo structures
    Shimaa A. Abdellatef, Akihiko Ohi, Toshihide Nabatame, Akiyoshi Taniguchi
    Biomaterials Science, 2014
  • Optical nanosphere sensor based on shell-by-shell fabrication for removal of toxic metals from human blood
    S. A. El‐Safty, S. Abdellatef, M. Ismael, A. Shahat
    Advanced Healthcare Materials, 2013
  • Synthesis and investigation of 2-propylpentanoyl amino acid and dipeptide conjugates as novel anticonvulsants
    Egyptian Journal of Chemistry, 2010