Samer Saleem Alshkarchy

@uoqasim.edu.iq

College of Veterinary Medicine, Pathology and poultry disease department.
Al-Qasim Green University

Samer Saleem Alshkarchy


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https://researchid.co/samer.alshakrchy

RESEARCH, TEACHING, or OTHER INTERESTS

Aquatic Science, Aquatic Science, Agricultural and Biological Sciences, General Agricultural and Biological Sciences
11

Scopus Publications

113

Scholar Citations

4

Scholar h-index

3

Scholar i10-index

Scopus Publications

  • AI-driven multi-omics integration in precision oncology: bridging the data deluge to clinical decisions
    Chou-Yi Hsu, Shavan Askar, Samer Saleem Alshkarchy, Priya Priyadarshini Nayak, Kassem A. L. Attabi, et al.
    Clinical and Experimental Medicine, 2026
  • Targeting prostate cancer through reactive oxygen species: Advances in photothermal and sonodynamic therapies
    Ridha.M. Lefta, Samer Saleem Alshkarchy, Thekra F. Ali, Majid S. Jabir, Wesam R. Kadhum
    Nanomedicine Nanotechnology Biology and Medicine, 2026
  • Comprehensive in silico genomic surveillance of β-lactam and methicillin resistance in Staphylococcus aureus: Machine learning–based analysis of lineage dynamics and global evolution
    Saeid Sadeghi Ghazi Chaki, Bilal Khaleel Midhin, Samer Saleem Alshkarchy, Mahshid Kalantar-Neyestanaki, Reham yahya albaz, et al.
    Infection Genetics and Evolution, 2026
  • Association between serum uric acid to creatinine ratio with metabolic profile in subjects with non-alcoholic fatty liver disease (NAFLD)
    Amr Ali Mohamed Abdelgawwad El-Sehrawy, Samer Saleem Alshkarchy, Ali Kamil Kareem, Marwah Suliman Maashi, Zahraa Abbas Al-Khafaji, et al.
    BMC Endocrine Disorders, 2025
  • CRISPR/Cas-mediated lateral flow assays toward the point-of-care pathogenic bacteria detection: Recent advances and future trends
    Amr Ali Mohamed Abdelgawwad El-Sehrawy, A.K. Kareem, Samer Saleem Alshkarchy, Soumya V. Menon, Yasser Alraey, et al.
    Microchemical Journal, 2025
  • Effect of propolis on gene expiration IL-1β in Cyprinus carpio challenged with Aeromonas hydrophilia
    International Journal of Aquatic Biology, 2024
  • Assessment of Valerian ( Valeriana officinalis) on Common Carp, Cyprinus carpio: Anesthesia
    Samer Saleem Alshkarchy, Khalidah S. Al-Niaeem, Raaed Sami Attee
    Iop Conference Series Earth and Environmental Science, 2023
    The anesthetic efficacy of Valerian (Valeriana officinalis) powders was evaluated on common carp (Cyprinus carpio L.) The following concentrations (250, 350, 450) mg/liter were used in three replicates. During the experiment, the period required for partial and total anesthesia and the time required for partial and total recovery was tested, as well as the number of red and white blood cells after and before Anesthesia in addition to blood serum enzymes represented (ALP, GOT, GPT, CK, and LDH in Ul / l). The results showed that the least period of anesthesia occurred in the fourth treatment, the treatment with a concentration of 450 mg / l, as well as the least period required for recovery, while the recovery period was the longest. And anesthesia in the first treatment exposed to a concentration of 250 mg/liter, and it was not noticed that there was a significant difference between each the number of red blood cells, white blood cells in the test fish before the experiment and after treatment with valerian plants, as well as each of (ALP, GOT, GPT, CK, and LDH in Ul / l) There were no significant differences between all treatments before and after exposure to valerian, and it is concluded from the study that valerian is a safe plant for use in anesthetizing fish.
  • The Babylon River's common carp (Cyprinus carpio) gills were used for the histopathological examination and PCR detection of Koi herpesvirus disease (KHVD)
    Sadeq Al-Haider, Ghusoon Alneamah, Samer Alshkarchy, Ahmed Farhood
    Bionatura, 2022
    The first outbreak of koi herpesvirus in Iraq occurred in Babylon Province in the floating cages in the Euphrates River from the Musayyib thermal electric power station to the Al-Hindiya Dam. Fish were suffering from gills rot that did not respond to treatment and lesions and ulcers on the fish's body. The fatalities reached 80%. was water temperature 24°C, pH 6.85, Salinity 760 ppt. So the present study aims to highlight the pathological changes in gills after the Koi herpes virus infection in Babylon Province. The study started after the detection of (KHV) by polymerase chain reaction ( PCR) from the suspected samples (30 ) for the detection of virus nucleic acid. Also, study the water characterization during the periods of outbreaks. The gills specimen was collected from the positive cases for gross and histopathological examination. The result showed that ten samples were positive for (KHV) infection. The gross and histopathological examination results showed severe congestion with necrotic foci and sloughing of secondary lamella with increased mucus secretion. In addition, necrosis in the primary lamellae, Edam and inflammatory cells infiltration with hyperplasia of the secondary lamellae with the presence of intranuclear inclusion body in all exanimated slides. Keywords: Koi Herpes; Cyprinus Carpio; Euphrates River; KHV; secondary lamellae; floating cages
  • Effect of heavy metals on physiological and histological status in liver of common carp Cyprinus carpio, reared in cages and wild in the Euphrates River, Babil / Iraq.
    Samer Saleem Alshkarchy, Amjed K. Raesen, Salah M. Najim
    Iop Conference Series Earth and Environmental Science, 2021
    The current study was conducted to examine the concentrations of some heavy metals (Fe, Zn, and Cu) in sediments, chemical and physical properties of water(Temperature, pH, Salinity, Total dissolved solid, Dissolved oxygen, Biological oxygen demand5, Alanin transporter enzyme, aspartase transporter enzyme, Alkaline phosphatase, and histological effects of the studied metal on liver of 96 cage fish and wild fish 4 fish per site Cyprinus carpio (Common carp) in the Euphrates River from October of 2018 until November of 2019. Three sites were selected on the Euphrates River in the middle of Iraq. The first site was Abu Luka, the second site was Al Saddah and the third site was the village of Al-Hussein. The results showed that in the first and second sites, the concentration of heavy metal in sediments and fish liver was greater than in the third site. In general, the cage fish at the first and second sites were higher than the wild fish. It was also noticed that the heavy metal concentration of both fish and sediment took the following order according to the seasons of the year, from the highest concentration of heavy metals to the lowest (summer > spring > autumn > winter). It was found that liver enzymes were directly affected by the presence of high concentrations of heavy Metals. So, both the ALT and AST increased in the first and second sites as compared to the third site. But the ALP value decreased with the increase in the concentration of the studied metal. The results of the histological slicing of the liver in the first and second places revealed a breakdown of the hepatocytes with the creation of gaps between the cells. Several spaces filled with remains of the destructed cells from the visceral tissue of the liver with infiltration of inflammatory cells in the infected area of the fish liver. It is the region’s first study that was concerned with the impact of heavy metal levels in the environment on cage fish and their relationship to blood components and liver enzymes.
  • Seasonal Investigation of Cu, Cr, Al, Mn Concentration in Coptodon Zillii Fish Captured from Babil Drainage Network, Iraq
    Biochemical and Cellular Archives, 2021
  • Study of some histopathological effects of paraquat insecticide toxicity in common carp fish, cyprinus carpio L.
    Biochemical and Cellular Archives, 2020

RECENT SCHOLAR PUBLICATIONS

  • AI-driven multi-omics integration in precision oncology: bridging the data deluge to clinical decisions
    CY Hsu, S Askar, SS Alshkarchy, PP Nayak, KAL Attabi, MA Khan, ...
    Clinical and experimental medicine 26 (1), 29 , 2026
    2026
    Citations: 57
  • Study of antioxidant, antimicrobial, and α -glucosidase inhibitory activities of symmetrical N,N ′-methylene bisamides and their catalyzed synthesis with humic acid
    K Aoues, HB Mohammed, SS Alshkarchy, H AlMohamadi, MS Jabir, ...
    Chemical Papers, 1-12 , 2026
    2026
  • Innovative approaches in the treatment of hematologic malignancies: the role of CRISPR-engineered microbiomes along the gut-immune axis in immunotherapy development
    CY Hsu, AAMA El-Sehrawy, SS Alshkarchy, AS Abdul, S Ganesan, ...
    Cancer Cell International , 2026
    2026
  • Air pollution and male infertility: A meta-umbrella study of evidence on semen quality
    R Margiana, MA Najim, AT Abed, SS Alshkarchy, P Yáñez-Moretta, ...
    Medicine 105 (10), e47806 , 2026
    2026
  • Comprehensive in silico genomic surveillance of β-lactam and methicillin resistance in Staphylococcus aureus: Machine learning–based analysis of lineage dynamics and global …
    SSG Chaki, BK Midhin, SS Alshkarchy, M Kalantar-Neyestanaki, ...
    Infection, Genetics and Evolution, 105862 , 2025
    2025
    Citations: 1
  • Association between serum uric acid to creatinine ratio with metabolic profile in subjects with non-alcoholic fatty liver disease (NAFLD)
    AAMA El-Sehrawy, SS Alshkarchy, AK Kareem, MS Maashi, ZA Al-Khafaji, ...
    BMC Endocrine Disorders 25 (1), 1-10 , 2025
    2025
    Citations: 1
  • Targeting prostate cancer through reactive oxygen species: Advances in photothermal and sonodynamic therapies
    RM Lefta, SS Alshkarchy, TF Ali, MS Jabir, WR Kadhum
    Nanomedicine: Nanotechnology, Biology and Medicine, 102881 , 2025
    2025
  • CRISPR/Cas-mediated lateral flow assays toward the point-of-care pathogenic bacteria detection: Recent advances and future trends
    AAMA El-Sehrawy, AK Kareem, SS Alshkarchy, SV Menon, Y Alraey, ...
    Microchemical Journal, 116227 , 2025
    2025
    Citations: 1
  • Effect of propolis on gene expiration IL-1? in Cyprinus carpio challenged with Aeromonas hydrophilia
    MA Al-Gburi, SS Alshkarchy, BAAJ Al-Janabi, MN Odhah
    International Journal of Aquatic Biology 12 (2), 188-194 , 2024
    2024
    Citations: 1
  • Molecular diagnosis of Hymenolepis diminuta in human and rats in Babylon Province, Iraq
    AM Al-Musawi, SM Kareem, H Alseady, TAH AL-Rubeaye, ...
    International Journal of Veterinary Research 3 (2), 9-19 , 2023
    2023
  • Assessment of Valerian (Valeriana officinalis) on Common Carp, Cyprinus carpio: Anesthesia
    SS Alshkarchy, KS Al-Niaeem, RS Attee
    IOP Conference Series: Earth and Environmental Science 1215 (1), 012061 , 2023
    2023
    Citations: 1
  • Determination of trace metals in some organs of Carassius carassius (Linnaeus, 1758) fish and histopathological change in the Babil drainage network, Iraq
    GAA Alneamah, SS Alshkarchy, SM Al-Haider
    International Journal of Veterinary Research 3 (1), 13-21 , 2023
    2023
  • Combined effect of Pleurotus sajor-caju and earthworm in reduction of physical characteristics, cellulose, hemicellulose and lignin content in coir pith compost
    P Saranraj, SS Alshkarchy, GS Prasath, M Manigandan, ...
    International Journal of Entomology Research 7 (11), 117-119 , 2022
    2022
    Citations: 1
  • The Babylon River's common carp (Cyprinus carpio) gills were used for the histopathological examination and PCR detection of Koi herpesvirus disease (KHVD)
    AH Sadeq, A Ghusoon, A Samer, F Ahmed
    Bionatura Latin American Journal of Biotechnology and Life Sciences 7 (4), 3 , 2022
    2022
    Citations: 2
  • Histopathological Effects of Some Heavy Metals and Environmental Factors on Brain of Common Carp Cyprinus carpio, Reared in cages and Wild Fish in Euphrates River, Babil, Iraq
    A Samer, N Salah, R Amjed
    Indian Journal of Ecology 49 (6), 2312-2321 , 2022
    2022
    Citations: 1
  • Consumers Purchase Intention for Energy Efficient Household Appliances in Pakistan
    MI Chani, B Tariq, MS Ali
    Review of Economics and Development Studies 8 (3), 277-295 , 2022
    2022
    Citations: 1
  • WILD MINT, Mentha piperita TO ANESTHETIZE FINGERLINGS OF THE COMMON CARP Cyprinus carpio
    SS Alshkarchy, KS Al-Niaeem, AK Resen
    Indo – Asian Journal of Multidisciplinary Research (IAJMR) 8 (4), 2619 – 2626 , 2022
    2022
  • Effect of heavy metals on physiological and histological status in liver of common carp Cyprinus carpio , reared in cages and wild in the Euphrates River, Babil / Iraq.
    SS Alshkarchy, AK Raesen, SM Najim
    IOP Conference Series: Earth and Environmental Science 779 (1), 012066 , 2021
    2021
    Citations: 18
  • SEASONAL INVESTIGATION OF Cu, Cr, Al, Mn CONCENTRATION IN COPTODON ZILLII FISH CAPTURED FROM BABIL DRAINAGE NETWORK, IRAQ.
    AM Kadim Al-Musawi, SS Alshkarchy, AA Hasan Al Isawi
    Biochemical & Cellular Archives 21 (1) , 2021
    2021
    Citations: 2
  • Estimation of Concentration of Heavy Metals in Planilizaa abu Fish in Babil Drainage Network, Iraq
    SS Alshkarchy, AMK Al-Musawi, M Obayes, ALJ Abdullh
    Indian Journal of Ecology 48 (Special Issue (17)), 347-349 , 2021
    2021
    Citations: 1

MOST CITED SCHOLAR PUBLICATIONS

  • AI-driven multi-omics integration in precision oncology: bridging the data deluge to clinical decisions
    CY Hsu, S Askar, SS Alshkarchy, PP Nayak, KAL Attabi, MA Khan, ...
    Clinical and experimental medicine 26 (1), 29 , 2026
    2026
    Citations: 57
  • Effect of heavy metals on physiological and histological status in liver of common carp Cyprinus carpio , reared in cages and wild in the Euphrates River, Babil / Iraq.
    SS Alshkarchy, AK Raesen, SM Najim
    IOP Conference Series: Earth and Environmental Science 779 (1), 012066 , 2021
    2021
    Citations: 18
  • Testduckweed .Lemnas pp as a potential food for grass carp Ctenopharhyngodonidell and common carp Cyprinuscarpio L
    SS Al-Shkakrchy
    Al-Anbar Journal of Veterinary Sciences 6 (1), 44-55 , 2013
    2013
    Citations: 15
  • Evaluating the efficiency of the aqueous extract of lavender (Lavandula angustifolia) Miller in anesthesia of common carp (Cyprinus carpio) fingerlings
    S Alshkarchy, K Al-Niaeem, A Resen
    Life Science Archives 6 (5), 1975-1981 , 2020
    2020
    Citations: 8
  • The Babylon River's common carp (Cyprinus carpio) gills were used for the histopathological examination and PCR detection of Koi herpesvirus disease (KHVD)
    AH Sadeq, A Ghusoon, A Samer, F Ahmed
    Bionatura Latin American Journal of Biotechnology and Life Sciences 7 (4), 3 , 2022
    2022
    Citations: 2
  • SEASONAL INVESTIGATION OF Cu, Cr, Al, Mn CONCENTRATION IN COPTODON ZILLII FISH CAPTURED FROM BABIL DRAINAGE NETWORK, IRAQ.
    AM Kadim Al-Musawi, SS Alshkarchy, AA Hasan Al Isawi
    Biochemical & Cellular Archives 21 (1) , 2021
    2021
    Citations: 2
  • PHYSIOLOGICAL EFFECT OF SOME METALS ON BLOOD PARAMETERS OF COMMON CARP Cyprinus carpio, REARED IN CAGES AND WILD IN THE EUPHRATES RIVER, BABIL, IRAQ
    SMN Samer S. Alshkarchy, Amjed K. Raesen
    Life Science Archives (LSA) 6 (4), 1907-1932 , 2020
    2020
    Citations: 2
  • Comprehensive in silico genomic surveillance of β-lactam and methicillin resistance in Staphylococcus aureus: Machine learning–based analysis of lineage dynamics and global …
    SSG Chaki, BK Midhin, SS Alshkarchy, M Kalantar-Neyestanaki, ...
    Infection, Genetics and Evolution, 105862 , 2025
    2025
    Citations: 1
  • Association between serum uric acid to creatinine ratio with metabolic profile in subjects with non-alcoholic fatty liver disease (NAFLD)
    AAMA El-Sehrawy, SS Alshkarchy, AK Kareem, MS Maashi, ZA Al-Khafaji, ...
    BMC Endocrine Disorders 25 (1), 1-10 , 2025
    2025
    Citations: 1
  • CRISPR/Cas-mediated lateral flow assays toward the point-of-care pathogenic bacteria detection: Recent advances and future trends
    AAMA El-Sehrawy, AK Kareem, SS Alshkarchy, SV Menon, Y Alraey, ...
    Microchemical Journal, 116227 , 2025
    2025
    Citations: 1
  • Effect of propolis on gene expiration IL-1? in Cyprinus carpio challenged with Aeromonas hydrophilia
    MA Al-Gburi, SS Alshkarchy, BAAJ Al-Janabi, MN Odhah
    International Journal of Aquatic Biology 12 (2), 188-194 , 2024
    2024
    Citations: 1
  • Assessment of Valerian (Valeriana officinalis) on Common Carp, Cyprinus carpio: Anesthesia
    SS Alshkarchy, KS Al-Niaeem, RS Attee
    IOP Conference Series: Earth and Environmental Science 1215 (1), 012061 , 2023
    2023
    Citations: 1
  • Combined effect of Pleurotus sajor-caju and earthworm in reduction of physical characteristics, cellulose, hemicellulose and lignin content in coir pith compost
    P Saranraj, SS Alshkarchy, GS Prasath, M Manigandan, ...
    International Journal of Entomology Research 7 (11), 117-119 , 2022
    2022
    Citations: 1
  • Histopathological Effects of Some Heavy Metals and Environmental Factors on Brain of Common Carp Cyprinus carpio, Reared in cages and Wild Fish in Euphrates River, Babil, Iraq
    A Samer, N Salah, R Amjed
    Indian Journal of Ecology 49 (6), 2312-2321 , 2022
    2022
    Citations: 1
  • Consumers Purchase Intention for Energy Efficient Household Appliances in Pakistan
    MI Chani, B Tariq, MS Ali
    Review of Economics and Development Studies 8 (3), 277-295 , 2022
    2022
    Citations: 1
  • Estimation of Concentration of Heavy Metals in Planilizaa abu Fish in Babil Drainage Network, Iraq
    SS Alshkarchy, AMK Al-Musawi, M Obayes, ALJ Abdullh
    Indian Journal of Ecology 48 (Special Issue (17)), 347-349 , 2021
    2021
    Citations: 1
  • Study of antioxidant, antimicrobial, and α -glucosidase inhibitory activities of symmetrical N,N ′-methylene bisamides and their catalyzed synthesis with humic acid
    K Aoues, HB Mohammed, SS Alshkarchy, H AlMohamadi, MS Jabir, ...
    Chemical Papers, 1-12 , 2026
    2026
  • Innovative approaches in the treatment of hematologic malignancies: the role of CRISPR-engineered microbiomes along the gut-immune axis in immunotherapy development
    CY Hsu, AAMA El-Sehrawy, SS Alshkarchy, AS Abdul, S Ganesan, ...
    Cancer Cell International , 2026
    2026
  • Air pollution and male infertility: A meta-umbrella study of evidence on semen quality
    R Margiana, MA Najim, AT Abed, SS Alshkarchy, P Yáñez-Moretta, ...
    Medicine 105 (10), e47806 , 2026
    2026
  • Targeting prostate cancer through reactive oxygen species: Advances in photothermal and sonodynamic therapies
    RM Lefta, SS Alshkarchy, TF Ali, MS Jabir, WR Kadhum
    Nanomedicine: Nanotechnology, Biology and Medicine, 102881 , 2025
    2025