Milind Ratnaparkhe

RESEARCH INTERESTS

Plant Genomics, Bioinformatics, Legumes

RECENT SCHOLAR PUBLICATIONS

A novel apache spark-based 14-dimensional scalable feature extraction approach for the clustering of genomics data
R Dwivedi, A Tiwari, N Bharill, M Ratnaparkhe, P Mogre, P Gadge, ...
The Journal of Supercomputing 80 (3), 3554-3588 2024



A Novel Sampled Clustering Algorithm for Rice Phenotypic Data
M Singh, K Ahuja, MB Ratnaparkhe
arXiv preprint arXiv:2312.14920 2023



A Novel Feature Extraction Approach for the Clustering and Classification of Genome Sequences
R Dwivedi, A Tiwari, N Bharill, M Ratnaparkhe, A Tripathi, P Jha
2023 IEEE Symposium Series on Computational Intelligence (SSCI), 1018-1023 2023



Scalable Kernelized Deep Fuzzy Clustering Algorithms for Big Data
P Jha, A Tiwari, N Bharill, M Ratnaparkhe, OP Patel, A Gupta, D Sukhija, ...
2023 IEEE Symposium Series on Computational Intelligence (SSCI), 1322-1327 2023



An incremental clustering method based on multiple objectives for dynamic data analysis
R Dwivedi, A Tiwari, N Bharill, M Ratnaparkhe, R Soni, R Mahbubani, ...
Multimedia Tools and Applications, 1-21 2023



A novel clustering-based hybrid feature selection approach using ant colony optimization
R Dwivedi, A Tiwari, N Bharill, M Ratnaparkhe
Arabian Journal for Science and Engineering 48 (8), 10727-10744 2023



Apache Spark-based scalable feature extraction approaches for protein sequence and their clustering performance analysis
P Jha, A Tiwari, N Bharill, M Ratnaparkhe, OP Patel, N Harshith, ...
International Journal of Data Science and Analytics 15 (4), 359-378 2023



Necessity and challenges for exploration of nutritional potential of staple-food grade soybean
G Padalkar, R Mandlik, S Sudhakaran, S Vats, S Kumawat, V Kumar, ...
Journal of Food Composition and Analysis 117, 105093 2023



Machine learning algorithm for soybean leaf disease detection: Machine learning algorithm for soybean leaf disease detection
P JHA, A TIWARI, N BHARILL, M RATNAPARKHE, OMP PATEL, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



Evaluation of soybean genotypes for high temperature tolerance during reproductive stages: Evaluation of soybean genotypes for high temperature tolerance during reproductive stages
S CHANDRA, G KUMAWAT, GK SATPUTE, VS BHATIA, S GUPTA, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



Genome wide association studies reveals genetic loci associated with water logging tolerance in Soybean [Glycine max (L.) Merr.]: Genome wide association studies reveals
S CHANDRA, MB RATNAPARKHE, GK SATPUTE, S GUPTA, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



GWAS and transcriptome analysis reveal key loci associated with drought tolerance in soybean
MB RATNAPARKHE, GK SATPUTE, R RAGHUVANSHI, S CHANDRA, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



A consistent 100-seed weight QTL with pleiotropy for seed number/plant in soybean (Glycine max L.): A consistent 100-seed weight QTL with pleiotropy for seed number/plant in
G KUMAWAT, S MARANNA, H SHRIVASTAVA, A YADAV, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



Genome-wide association studies on charcoal rot resistance in soybean (Glycine max, L.): Genome-wide association studies on charcoal rot resistance in soybean (Glycine max, L.)
V NATARAJ, PK AMRATE, MB RATNAPARKHE, S MARANNA, ...
Journal of Oilseeds Research 40 (Specialissue) 2023



A novel feature extraction technique for the clustering of SNP data
R DWIVEDI, A TIWARI, N BHARILL, M RATNAPARKHE
Journal of Oilseeds Research 40 (Specialissue) 2023



A novel feature extraction technique for the clustering of SNP data
R DWIVEDI, A TIWARI, N BHARILL, M RATNAPARKHE
2023



Recent advancement in management of soybean charcoal rot caused by Macrophomina phaseolina
LS Rajput, S Kumar, V Nataraj, M Shivakumar, K Pathak, S Jaiswal, ...
Macrophomina Phaseolina, 55-74 2023



Development of improved genotypes for extra early maturity, higher yield and Mungbean Yellow Mosaic India Virus (MYMIV) resistance in soybean (Glycine max L.)
S MARANNA, G Kumawat, V Nataraj, B Gill, R Nargund, A Sharma, ...
Crop and Pasture Science 2023



Scalable Feature Extraction and Fuzzy Clustering for Large RNAseq Analysis on High-Performance Computing
P Jha, A Tiwari, N Bharill, M Ratnaparkhe, OP Patel, A Chauhan, ...
2023



Crop improvement against Colletotrichum truncatum using molecular breeding approaches
V Nataraj, LS Rajput, M Shivakumar, G Kumawat, S Kumar, ...
QTL Mapping in Crop Improvement, 45-56 2023

MOST CITED SCHOLAR PUBLICATIONS

A linkage map of the chickpea (Cicer arietinum L.) genome based on recombinant inbred lines from a C. arietinum C. reticulatum cross: localization of resistance genes for
P Winter, AM Benko-Iseppon, B Httel, M Ratnaparkhe, A Tullu, ...
Theoretical and Applied Genetics 101, 1155-1163 2000
Citations: 394



Inheritance of inter-simple-sequence-repeat polymorphisms and linkage with a fusarium wilt resistance gene in chickpea
MB Ratnaparkhe, DK Santra, A Tullu, FJ Muehlbauer
Theoretical and Applied Genetics 96 (3), 348-353 1998
Citations: 262



Identification and mapping of QTLs conferring resistance to ascochyta blight in chickpea
D Santra, M Ratnaparkhe, FJ Muelhbauer, WJ Kaiser
Crop Science 2000
Citations: 248



Inter-simple-sequence-repeat (ISSR) polymorphisms are useful for finding markers associated with disease resistance gene clusters
M Ratnaparkhe, FJ Muelhbauer
Theoretical and Applied Genetics 1998
Citations: 243



Genetic and physical mapping of the grapevine powdery mildew resistance gene, Run1, using a bacterial artificial chromosome library
CL Barker, T Donald, J Pauquet, MB Ratnaparkhe, A Bouquet, ...
Theoretical and applied genetics 111, 370-377 2005
Citations: 227



Genetic fingerprinting of pigeonpea [Cajanus cajan (L.) Millsp.] and its wild relatives using RAPD markers
MB Ratnaparkhe, VS Gupta, MR Ven Murthy, PK Ranjekar
Theoretical and applied genetics 91, 893-898 1995
Citations: 197



Differential accumulation of retroelements and diversification of NB-LRR disease resistance genes in duplicated regions following polyploidy in the ancestor of soybean
RW Innes, C Ameline-Torregrosa, T Ashfield, E Cannon, SB Cannon, ...
Plant Physiology 148 (4), 1740-1759 2008
Citations: 141



ICAR Indian Institute of Soybean Research
MB Ratnaparkhe
India 2021
Citations: 77



Evolution of a Complex Disease Resistance Gene Cluster in Diploid Phaseolus and Tetraploid Glycine
T Ashfield, AN Egan, BE Pfeil, NWG Chen, R Podicheti, MB Ratnaparkhe, ...
Plant physiology 159 (1), 336-354 2012
Citations: 72



Comparative analysis of peanut NBS‐LRR gene clusters suggests evolutionary innovation among duplicated domains and erosion of gene microsynteny
MB Ratnaparkhe, X Wang, J Li, RO Compton, LK Rainville, C Lemke, ...
New Phytologist 192 (1), 164-178 2011
Citations: 62



Plant miRNAome and antiviral resistance: a retrospective view and prospective challenges
SV Ramesh, MB Ratnaparkhe, G Kumawat, GK Gupta, SM Husain
Virus Genes 48, 1-14 2014
Citations: 54



Matita, a new retroelement from peanut: characterization and evolutionary context in the light of the Arachis A–B genome divergence
S Nielen, BS Vidigal, SCM Leal-Bertioli, M Ratnaparkhe, AH Paterson, ...
Molecular Genetics and Genomics 287, 21-38 2012
Citations: 53



Genetics, genomics, and breeding of soybean
K Bilyeu, MB Ratnaparkhe, C Kole
CRC Press 2012
Citations: 48



Replication of nonautonomous retroelements in soybean appears to be both recent and common
A Wawrzynski, T Ashfield, NWG Chen, J Mammadov, A Nguyen, ...
Plant Physiology 148 (4), 1760-1771 2008
Citations: 46



QTLomics in soybean: a way forward for translational genomics and breeding
G Kumawat, S Gupta, MB Ratnaparkhe, S Maranna, GK Satpute
Frontiers in Plant Science 7, 228633 2016
Citations: 40



The repetitive component of the A genome of peanut (Arachis hypogaea) and its role in remodelling intergenic sequence space since its evolutionary divergence from the B genome
DJ Bertioli, B Vidigal, S Nielen, MB Ratnaparkhe, TH Lee, ...
Annals of Botany 112 (3), 545-559 2013
Citations: 39



WAASB based stability analysis and simultaneous selection for grain yield and early maturity in soybean
V Nataraj, A Bhartiya, CP Singh, HN Devi, MP Deshmukh, P Verghese, ...
Agronomy Journal 2021
Citations: 30



Breeding for higher yield, early maturity, wider adaptability and waterlogging tolerance in soybean (Glycine max L.): A case study
S Maranna, V Nataraj, G Kumawat, S Chandra, V Rajesh, R Ramteke, ...
Scientific reports 11 (1), 22853 2021
Citations: 28



Apache Spark based kernelized fuzzy clustering framework for single nucleotide polymorphism sequence analysis
P Jha, A Tiwari, N Bharill, M Ratnaparkhe, M Mounika, N Nagendra
Computational Biology and Chemistry 92, 107454 2021
Citations: 26



Glycine
MB Ratnaparkhe, RJ Singh, JJ Doyle
Wild crop relatives: genomic and breeding resources: legume crops and 2010
Citations: 25