Andre Filipe de Sousa Ferreira

@algoritmi.uminho.pt

PhD student
Center Algoritmi / LASI, University of Minho, Braga

Andre Filipe de Sousa Ferreira


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https://researchid.co/shadowtwin

RESEARCH, TEACHING, or OTHER INTERESTS

Biomedical Engineering, Computer Science, Artificial Intelligence
367

Scholar Citations

8

Scholar h-index

8

Scholar i10-index

RECENT SCHOLAR PUBLICATIONS

  • GBM-Reservoir: Brain tumor (Glioblastoma Multiforme) MRI dataset collection with ground truth segmentation masks
    N Solak, A Ferreira, G Luijten, B Puladi, V Alves, J Egger
    Data in Brief 58, 111287 , 2025
    2025
    Citations: 2
  • Beyond Benchmarks: Towards Robust Artificial Intelligence Bone Segmentation in Socio-Technical Systems
    K Xie, LJ Gruber, M Crampen, Y Li, A Ferreira, E Tappeiner, M Gillot, ...
    medRxiv, 2025.06. 11.25329022 , 2025
    2025
    Citations: 4
  • Comparative Analysis of nnUNet and MedNeXt for Head and Neck Tumor Segmentation in MRI-guided Radiotherapy
    N Moradi, A Ferreira, B Puladi, J Kleesiek, E Fatemizadeh, G Luijten, ...
    🥇 arXiv preprint arXiv:2411.14752 , 2024
    2024
    Citations: 4
  • Improved Multi-Task Brain Tumour Segmentation with Synthetic Data Augmentation
    A Ferreira, T Jesus, B Puladi, J Kleesiek, V Alves, J Egger
    🥇🥉 arXiv preprint arXiv:2411.04632 , 2024
    2024
    Citations: 7
  • Brain Tumour Removing and Missing Modality Generation using 3D WDM
    A Ferreira, G Luijten, B Puladi, J Kleesiek, V Alves, J Egger
    🥈 arXiv preprint arXiv:2411.04630 , 2024
    2024
    Citations: 4
  • A MedShapeNet Foundation Model
    JE Ahmed Yassin, Gijs Luijten, Abdelrahman Elsakka, André Ferreira, Behrus ...
    https://github.com/jrHoss/MedShapeNet-Foundation-Model , 2024
    2024
  • Deep Dive into MRI: Exploring Deep Learning Applications in 0.55 T and 7T MRI
    AC Alves, A Ferreira, B Puladi, J Egger, V Alves
    arXiv preprint arXiv:2407.01318 , 2024
    2024
    Citations: 1
  • Insights into Predicting Tooth Extraction from Panoramic Dental Images: Artificial Intelligence vs. Dentists
    I Motmaen, K Xie, L Schönbrunn, J Berens, K Grunert, AM Plum, ...
    Clinical Oral Investigations 28 (7), 381 , 2024
    2024
    Citations: 12
  • A Baseline Solution for the ISBI 2024 Dreaming Challenge
    T Van Meegdenburg, G Luijten, J Kleesiek, B Puladi, A Ferreira, J Egger, ...
    2024 IEEE International Symposium on Biomedical Imaging (ISBI), 1-3 , 2024
    2024
    Citations: 2
  • Generalisation of Segmentation Using Generative Adversarial Networks
    A Ferreira, G Luijten, B Puladi, J Kleesiek, V Alves, J Egger
    🥇 2024 IEEE International Symposium on Biomedical Imaging (ISBI), 1-4 , 2024
    2024
    Citations: 2
  • How we won BraTS 2023 Adult Glioma challenge? Just faking it! Enhanced Synthetic Data Augmentation and Model Ensemble for brain tumour segmentation
    A Ferreira, N Solak, J Li, P Dammann, J Kleesiek, V Alves, J Egger
    🥇 arXiv preprint arXiv:2402.17317 , 2024
    2024
    Citations: 67
  • Deep PCCT: Photon Counting Computed Tomography Deep Learning Applications Review
    AC Alves, A Ferreira, G Luijten, J Kleesiek, B Puladi, J Egger, V Alves
    arXiv preprint arXiv:2402.04301 , 2024
    2024
    Citations: 6
  • GAN-based generation of realistic 3D volumetric data: A systematic review and taxonomy
    A Ferreira, J Li, KL Pomykala, J Kleesiek, V Alves, J Egger
    Medical image analysis, 103100 , 2024
    2024
    Citations: 68
  • Enhanced Data Augmentation Using Synthetic Data for Brain Tumour Segmentation
    A Ferreira, N Solak, J Li, P Dammann, J Kleesiek, V Alves, J Egger
    International Challenge on Cross-Modality Domain Adaptation for Medical … , 2023
    2023
    Citations: 4
  • MedShapeNet--A Large-Scale Dataset of 3D Medical Shapes for Computer Vision
    J Li, A Pepe, C Gsaxner, G Luijten, Y Jin, N Ambigapathy, E Nasca, ...
    arXiv preprint arXiv:2308.16139 , 2023
    2023
    Citations: 92
  • Open-source skull reconstruction with MONAI
    J Li, A Ferreira, B Puladi, V Alves, M Kamp, M Kim, F Nensa, J Kleesiek, ...
    SoftwareX 23, 101432 , 2023
    2023
    Citations: 6
  • Generation of Synthetic X-Rays Images of Rib Fractures Using a 2D Enhanced Alpha-GAN for Data Augmentation
    M Lindo, A Ferreira, J Egger, V Alves
    World Conference on Information Systems and Technologies, 288-297 , 2023
    2023
    Citations: 1
  • MedShapeNet--A Large-Scale Dataset of 3D Medical Shapes for Computer Vision
    M Reyes
    Cornell University , 2023
    2023
    Citations: 1
  • Radiomics in head and neck cancer outcome predictions
    M Gonçalves, C Gsaxner, A Ferreira, J Li, B Puladi, J Kleesiek, J Egger, ...
    Diagnostics 12 (11), 2733 , 2022
    2022
    Citations: 26
  • Autopet challenge: Combining nn-unet with swin unetr augmented by maximum intensity projection classifier
    L Heiliger, Z Marinov, M Hasin, A Ferreira, J Fragemann, K Pomykala, ...
    arXiv preprint arXiv:2209.01112 , 2022
    2022
    Citations: 17

MOST CITED SCHOLAR PUBLICATIONS

  • MedShapeNet--A Large-Scale Dataset of 3D Medical Shapes for Computer Vision
    J Li, A Pepe, C Gsaxner, G Luijten, Y Jin, N Ambigapathy, E Nasca, ...
    arXiv preprint arXiv:2308.16139 , 2023
    2023
    Citations: 92
  • GAN-based generation of realistic 3D volumetric data: A systematic review and taxonomy
    A Ferreira, J Li, KL Pomykala, J Kleesiek, V Alves, J Egger
    Medical image analysis, 103100 , 2024
    2024
    Citations: 68
  • How we won BraTS 2023 Adult Glioma challenge? Just faking it! Enhanced Synthetic Data Augmentation and Model Ensemble for brain tumour segmentation
    A Ferreira, N Solak, J Li, P Dammann, J Kleesiek, V Alves, J Egger
    🥇 arXiv preprint arXiv:2402.17317 , 2024
    2024
    Citations: 67
  • Radiomics in head and neck cancer outcome predictions
    M Gonçalves, C Gsaxner, A Ferreira, J Li, B Puladi, J Kleesiek, J Egger, ...
    Diagnostics 12 (11), 2733 , 2022
    2022
    Citations: 26
  • GAN-based generation of realistic 3D data A systematic review and taxonomy
    A Ferreira, J Li, KL Pomykala, J Kleesiek, V Alves, J Egger
    arXiv preprint arXiv:2207.01390 , 2022
    2022
    Citations: 26
  • Autopet challenge: Combining nn-unet with swin unetr augmented by maximum intensity projection classifier
    L Heiliger, Z Marinov, M Hasin, A Ferreira, J Fragemann, K Pomykala, ...
    arXiv preprint arXiv:2209.01112 , 2022
    2022
    Citations: 17
  • Insights into Predicting Tooth Extraction from Panoramic Dental Images: Artificial Intelligence vs. Dentists
    I Motmaen, K Xie, L Schönbrunn, J Berens, K Grunert, AM Plum, ...
    Clinical Oral Investigations 28 (7), 381 , 2024
    2024
    Citations: 12
  • Generation of Synthetic Rat Brain MRI Scans with a 3D Enhanced Alpha Generative Adversarial Network
    A Ferreira, R Magalhães, S Mériaux, V Alves
    Applied Sciences 12 (10), 4844 , 2022
    2022
    Citations: 10
  • Improved Multi-Task Brain Tumour Segmentation with Synthetic Data Augmentation
    A Ferreira, T Jesus, B Puladi, J Kleesiek, V Alves, J Egger
    🥇🥉 arXiv preprint arXiv:2411.04632 , 2024
    2024
    Citations: 7
  • Deep PCCT: Photon Counting Computed Tomography Deep Learning Applications Review
    AC Alves, A Ferreira, G Luijten, J Kleesiek, B Puladi, J Egger, V Alves
    arXiv preprint arXiv:2402.04301 , 2024
    2024
    Citations: 6
  • Open-source skull reconstruction with MONAI
    J Li, A Ferreira, B Puladi, V Alves, M Kamp, M Kim, F Nensa, J Kleesiek, ...
    SoftwareX 23, 101432 , 2023
    2023
    Citations: 6
  • Beyond Benchmarks: Towards Robust Artificial Intelligence Bone Segmentation in Socio-Technical Systems
    K Xie, LJ Gruber, M Crampen, Y Li, A Ferreira, E Tappeiner, M Gillot, ...
    medRxiv, 2025.06. 11.25329022 , 2025
    2025
    Citations: 4
  • Comparative Analysis of nnUNet and MedNeXt for Head and Neck Tumor Segmentation in MRI-guided Radiotherapy
    N Moradi, A Ferreira, B Puladi, J Kleesiek, E Fatemizadeh, G Luijten, ...
    🥇 arXiv preprint arXiv:2411.14752 , 2024
    2024
    Citations: 4
  • Brain Tumour Removing and Missing Modality Generation using 3D WDM
    A Ferreira, G Luijten, B Puladi, J Kleesiek, V Alves, J Egger
    🥈 arXiv preprint arXiv:2411.04630 , 2024
    2024
    Citations: 4
  • Enhanced Data Augmentation Using Synthetic Data for Brain Tumour Segmentation
    A Ferreira, N Solak, J Li, P Dammann, J Kleesiek, V Alves, J Egger
    International Challenge on Cross-Modality Domain Adaptation for Medical … , 2023
    2023
    Citations: 4
  • Generation of Synthetic Data: A Generative Adversarial Networks Approach
    A Ferreira, R Magalhães, V Alves
    Big Data Analytics and Artificial Intelligence in the Healthcare Industry … , 2022
    2022
    Citations: 4
  • GBM-Reservoir: Brain tumor (Glioblastoma Multiforme) MRI dataset collection with ground truth segmentation masks
    N Solak, A Ferreira, G Luijten, B Puladi, V Alves, J Egger
    Data in Brief 58, 111287 , 2025
    2025
    Citations: 2
  • A Baseline Solution for the ISBI 2024 Dreaming Challenge
    T Van Meegdenburg, G Luijten, J Kleesiek, B Puladi, A Ferreira, J Egger, ...
    2024 IEEE International Symposium on Biomedical Imaging (ISBI), 1-3 , 2024
    2024
    Citations: 2
  • Generalisation of Segmentation Using Generative Adversarial Networks
    A Ferreira, G Luijten, B Puladi, J Kleesiek, V Alves, J Egger
    🥇 2024 IEEE International Symposium on Biomedical Imaging (ISBI), 1-4 , 2024
    2024
    Citations: 2
  • Deep Dive into MRI: Exploring Deep Learning Applications in 0.55 T and 7T MRI
    AC Alves, A Ferreira, B Puladi, J Egger, V Alves
    arXiv preprint arXiv:2407.01318 , 2024
    2024
    Citations: 1