Tim Schaefer

@aesthetics.mpg.de

Research Sofware Engineer, Department of Cognitive Neuropsychology
Max-Planck Institute for Empirical Aesthetics



                    

https://researchid.co/timschaefer

EDUCATION

PhD, Bioinformatics. Goethe-University Frankfurt, Frankfurt am Main, Germany.

RESEARCH, TEACHING, or OTHER INTERESTS

Neuropsychology and Physiological Psychology, Multidisciplinary

618

Scholar Citations

15

Scholar h-index

17

Scholar i10-index

RECENT SCHOLAR PUBLICATIONS

  • Parsing Autism Heterogeneity: Transcriptomic Subgrouping of Imaging-Derived Phenotypes in Autism
    J Leyhausen, C Gurr, LM Berg, H Seelemeyer, B Hermila, T Schfer, ...
    Biological Psychiatry: Cognitive Neuroscience and Neuroimaging 2025

  • Gender-affirming mastectomy in transmasculine individuals in The Netherlands: a large cohort study on outcomes and trends
    WB van der Sluis, L Elfering, P Roijer, NM van Hout, T Schfer, ...
    International Journal of Transgender Health 26 (3), 630-639 2025

  • Evaluating Deep Learning Methods for the Correlation of Motion Artifacts Correction in Structural MRI Scans
    B Hermila, H Seelemeyer, J Leyhausen, L Berg, CM Pretzsch, T Schfer, ...
    INSAR 2025 2025

  • Gender-affirming orchiectomy in transgender and non-binary individuals: A large cohort study with middle-to long-term follow-up
    WB van der Sluis, JM Smit, T Schfer, MB Bouman
    International Journal of Transgender Health 26 (2), 459-463 2025

  • Bridging the scales: leveraging personalized disease models and deep phenotyping to dissect cognitive impairment in schizophrenia
    FJ Raabe, D Popovic, C Vetter, G Hasanaj, B Karslı, LE Fischer, ...
    medRxiv, 2025.02. 25.25322779 2025

  • Chronic exposure to glucocorticoids amplifies inhibitory neuron cell fate during human neurodevelopment in organoids
    L Dony, AC Krontira, L Kaspar, R Ahmad, IS Demirel, M Grochowicz, ...
    Science advances 11 (7), eadn8631 2025

  • Decomposing the Brain in Autism: Linking Behavioral Domains to Neuroanatomical Variation and Genomic Underpinnings
    H Seelemeyer, C Gurr, J Leyhausen, LM Berg, CM Pretzsch, T Schfer, ...
    Biological Psychiatry: Cognitive Neuroscience and Neuroimaging 2024

  • Patterns of brain maturation in autism and their molecular associations
    CM Pretzsch, M Arenella, JP Lerch, MV Lombardo, C Beckmann, ...
    JAMA psychiatry 81 (12), 1253-1264 2024

  • Systems Neuroscience Computing in Python (SyNCoPy): a python package for large-scale analysis of electrophysiological data
    G Mnke, T Schfer, M Parto-Dezfouli, DS Kajal, S Frtinger, JT Schmiedt, ...
    Frontiers in Neuroinformatics 18, 1448161 2024

  • Differences in intrinsic gray matter connectivity and their genomic underpinnings in autism spectrum disorder
    J Leyhausen, T Schfer, C Gurr, LM Berg, H Seelemeyer, CM Pretzsch, ...
    Biological psychiatry 95 (2), 175-186 2024

  • Seksuele gezondheid bij transvrouwen: Een onderzoek naar relevante aspecten van seksuele gezondheid en gewenste zorg voor en na de vaginoplastiek
    DBA Kroeze, T Schfer, SM Burke
    Tijdschrift voor Seksuologie 47 (3), 128-139 2023

  • The neuroanatomical substrates of autism and ADHD and their link to putative genomic underpinnings
    LM Berg, C Gurr, J Leyhausen, H Seelemeyer, A Bletsch, T Schaefer, ...
    Molecular autism 14 (1), 36 2023

  • Enhancing precision in human neuroscience
    S Nebe, M Reutter, DH Baker, J Blte, G Domes, M Gamer, A Grtner, ...
    Elife 12, e85980 2023

  • Altered Spatial Patterns of Neuroanatomical Development in Autism
    CM Pretzsch, M Arenella, M Lombardo, C Gurr, A Bletsch, T Schfer, ...
    INSAR 2023 2023

  • Associations between Longitudinal Changes in Cortical Thickness and Restricted/Repetitive Behaviours in Adolescents with Autism Spectrum Disorder.
    C Gurr, V Bieneck, A Bletsch, T Schfer, H Seelemeyer, CM Pretzsch, ...
    INSAR 2023 2023

  • Symptom Severity in the Two DSM-V Symptom Domains Is Differentially Associated with Neuroanatomical and Genomic Underpinnings of Autism Spectrum Disorder
    H Seelemeyer, C Gurr, L Berg, J Leyhausen, A Bletsch, T Schfer, ...
    INSAR 2023 2023

  • Cross-sectional and longitudinal neuroanatomical profiles of distinct clinical (adaptive) outcomes in autism
    CM Pretzsch, DL Floris, T Schfer, A Bletsch, C Gurr, MV Lombardo, ...
    Molecular Psychiatry 28 (5), 2158-2169 2023

  • Genital gender-affirming surgery for transgender women
    WB van der Sluis, T Schfer, THJ Nijhuis, MB Bouman
    Best Practice & Research Clinical Obstetrics & Gynaecology 86, 102297 2023

  • Excitatory/inhibitory imbalance in autism: the role of glutamate and GABA gene-sets in symptoms and cortical brain structure
    V Hollestein, G Poelmans, NJ Forde, CF Beckmann, C Ecker, C Mann, ...
    Translational Psychiatry 13 (1), 18 2023

  • Neurobiological correlates of change in adaptive behavior in autism
    CM Pretzsch, T Schfer, MV Lombardo, V Warrier, C Mann, A Bletsch, ...
    American Journal of Psychiatry 179 (5), 336-349 2022

MOST CITED SCHOLAR PUBLICATIONS

  • Excitatory/inhibitory imbalance in autism: the role of glutamate and GABA gene-sets in symptoms and cortical brain structure
    V Hollestein, G Poelmans, NJ Forde, CF Beckmann, C Ecker, C Mann, ...
    Translational Psychiatry 13 (1), 18 2023
    Citations: 103

  • Interindividual differences in cortical thickness and their genomic underpinnings in autism spectrum disorder
    C Ecker, CM Pretzsch, A Bletsch, C Mann, T Schaefer, S Ambrosino, ...
    American Journal of Psychiatry 179 (3), 242-254 2022
    Citations: 68

  • Enhancing precision in human neuroscience
    S Nebe, M Reutter, DH Baker, J Blte, G Domes, M Gamer, A Grtner, ...
    Elife 12, e85980 2023
    Citations: 63

  • Neurobiological correlates of change in adaptive behavior in autism
    CM Pretzsch, T Schfer, MV Lombardo, V Warrier, C Mann, A Bletsch, ...
    American Journal of Psychiatry 179 (5), 336-349 2022
    Citations: 37

  • fsbrain: an R package for the visualization of structural neuroimaging data
    T Schfer, C Ecker
    Biorxiv, 2020.09. 18.302935 2020
    Citations: 37

  • Genital gender-affirming surgery for transgender women
    WB van der Sluis, T Schfer, THJ Nijhuis, MB Bouman
    Best Practice & Research Clinical Obstetrics & Gynaecology 86, 102297 2023
    Citations: 35

  • Longitudinal changes in cortical thickness in adolescents with autism spectrum disorder and their association with restricted and repetitive behaviors
    V Bieneck, A Bletsch, C Mann, T Schfer, H Seelemeyer, N Hery, ...
    Genes 12 (12), 2024 2021
    Citations: 24

  • The neuroanatomical substrates of autism and ADHD and their link to putative genomic underpinnings
    LM Berg, C Gurr, J Leyhausen, H Seelemeyer, A Bletsch, T Schaefer, ...
    Molecular autism 14 (1), 36 2023
    Citations: 23

  • Bioinformatics analysis of whole slide images reveals significant neighborhood preferences of tumor cells in Hodgkin lymphoma
    J Hannig, H Schfer, J Ackermann, M Hebel, T Schfer, C Dring, ...
    PLoS Computational Biology 16 (1), e1007516 2020
    Citations: 21

  • Protein super-secondary structure and quaternary structure topology: theoretical description and application
    I Koch, T Schfer
    Current Opinion in Structural Biology 50, 134-143 2018
    Citations: 21

  • CD30 cell graphs of Hodgkin lymphoma are not scale-free—an image analysis approach
    H Schfer, T Schfer, J Ackermann, N Dichter, C Dring, S Hartmann, ...
    Bioinformatics 32 (1), 122-129 2016
    Citations: 21

  • Evaluation of a gadolinium-based nanoparticle (AGuIX) for contrast-enhanced MRI of the liver in a rat model of hepatic colorectal cancer metastases at 9.4 Tesla
    P Fries, D Morr, A Mller, F Lux, O Tillement, A Massmann, R Seidel, ...
    RFo-Fortschritte auf dem Gebiet der Rntgenstrahlen und der bildgebenden 2015
    Citations: 19

  • Atypical measures of diffusion at the gray‐white matter boundary in autism spectrum disorder in adulthood
    A Bletsch, T Schfer, C Mann, DS Andrews, E Daly, M Gudbrandsen, ...
    Human Brain Mapping 42 (2), 467-484 2021
    Citations: 18

  • Image database analysis of Hodgkin lymphoma
    T Schfer, H Schfer, A Schmitz, J Ackermann, N Dichter, C Dring, ...
    Computational biology and chemistry 46, 1-7 2013
    Citations: 18

  • A system for traded control teleoperation of manipulation tasks using intent prediction from hand gestures
    Y Oh, T Schfer, B Rther, M Toussaint, J Mainprice
    2021 30th IEEE International Conference on Robot & Human Interactive 2021
    Citations: 15

  • Cross-sectional and longitudinal neuroanatomical profiles of distinct clinical (adaptive) outcomes in autism
    CM Pretzsch, DL Floris, T Schfer, A Bletsch, C Gurr, MV Lombardo, ...
    Molecular Psychiatry 28 (5), 2158-2169 2023
    Citations: 13

  • Differences in intrinsic gray matter connectivity and their genomic underpinnings in autism spectrum disorder
    J Leyhausen, T Schfer, C Gurr, LM Berg, H Seelemeyer, CM Pretzsch, ...
    Biological psychiatry 95 (2), 175-186 2024
    Citations: 12

  • Chronic exposure to glucocorticoids amplifies inhibitory neuron cell fate during human neurodevelopment in organoids
    L Dony, AC Krontira, L Kaspar, R Ahmad, IS Demirel, M Grochowicz, ...
    Science advances 11 (7), eadn8631 2025
    Citations: 9

  • Computation and visualization of protein topology graphs including ligand information
    T Schfer, P May, I Koch
    German Conference on Bioinformatics 2012, 108-118 2012
    Citations: 9

  • Patterns of brain maturation in autism and their molecular associations
    CM Pretzsch, M Arenella, JP Lerch, MV Lombardo, C Beckmann, ...
    JAMA psychiatry 81 (12), 1253-1264 2024
    Citations: 8