Vijayachitra Modhukur

@ut.ee

Researcher, Faculty of Medicine, Institute of Clinical Medicine
University of Tartu

RESEARCH INTERESTS

Bioinformatics, Reproduction, Cancer biology

1188

Scholar Citations

8

Scholar h-index

8

Scholar i10-index

RECENT SCHOLAR PUBLICATIONS

  • Stanniocalcin protein expression in female reproductive organs: literature review and public cancer database analysis
    M Khatun, V Modhukur, TT Piltonen, JS Tapanainen, A Salumets
    Endocrinology 165 (10), bqae110 2024

  • Endometriotic lesions exhibit distinct metabolic signature compared to paired eutopic endometrium at the single-cell level
    M Sarsenova, A Lawarde, ADS Pathare, M Saare, V Modhukur, ...
    Communications Biology 7 (1), 1026 2024

  • O-268 Re-considering the endometrial microbiome: a comparison of DNA-and RNA-based sequencing techniques within the same cohort
    A Sola-Leyva, A Canha-Gouveia, I Prez-Prieto, E Salas-Espejo, ...
    Human Reproduction 39 (Supplement_1), deae108. 315 2024

  • Investigating the impact of vitrification on bovine ovarian tissue morphology, follicle survival, and transcriptomic signature
    SP Deligiannis, K Kask, V Modhukur, N Boskovic, M Ivask, Jaakma, ...
    Journal of Assisted Reproduction and Genetics 41 (4), 1035-1055 2024

  • 1133 ECLAI: personalized clinical management of endometrial cancer using liquid biopsy, genomics and artificial intelligence
    SV Moreno, V Modhukur, C Casas-Arozamena, JI Klett-Mingo, A Lawarde, ...
    International Journal of Gynecologic Cancer 34 (Suppl 1) 2024

  • ExplORRNet: An interactive web tool to explore stage-wise miRNA expression profiles and their interactions with mRNA and lncRNA in human breast and gynecological cancers
    A Lawarde, ES Rahmani, A Nath, D Lavogina, J Jaal, A Salumets, ...
    Non-coding RNA Research 9 (1), 125-140 2024

  • Inhibition of epigenetic and cell cycle-related targets in glioblastoma cell lines reveals that onametostat reduces proliferation and viability in both normoxic and hypoxic
    D Lavogina, MK Krlov, H Vellama, V Modhukur, V Di Nisio, H Lust, ...
    Scientific Reports 14 (1), 4303 2024

  • Exploring immunome and microbiome interplay in reproductive health: current knowledge, challenges, and novel diagnostic tools
    P Lingasamy, V Modhukur, R Mndar, A Salumets
    Seminars in Reproductive Medicine 2024

  • Users’ Concerns About Endometriosis on Social Media: Sentiment Analysis and Topic Modeling Study
    R Goel, V Modhukur, K Tr, A Salumets, R Sharma, M Peters
    Journal of Medical Internet Research 2023

  • The cervical transcriptome changes during the menstrual cycle but does not predict the window of implantation
    ADS Pathare, M Saare, A Meltsov, A Lawarde, V Modhukur, A Kalinina, ...
    Frontiers in Reproductive Health 5, 1224919 2023

  • MBMethPred: A Computational Framework for the Accurate Classification of Childhood Medulloblastoma Subgroups Using Data Integration and AI-Based Approaches
    E Sharif Rahmani, A Lawarde, P Lingasamy, S Vela Moreno, A Salumets, ...
    Frontiers in Genetics 14 2023

  • P-422 Ovarian tissue vitrification as a low-technology and cost-effective protocol for female fertility preservation: a bovine study
    SP Deligiannis, K Kask, V Modhukur, M Ivask, Jaakma, ...
    Human Reproduction 38 (Supplement_1), dead093. 772 2023

  • Inhibition of epigenetic and cell cycle-related targets in glioblastoma cell lines: onametostat reduces proliferation and viability in both normoxic and hypoxic conditions
    D Lavogina, MK Krolov, H Vellama, V Modhukur, V Di Nisio, H Lust, ...
    bioRxiv, 2023.10. 28.564517 2023

  • Chromatin modifier developmental pluripotency associated factor 4 (DPPA4) is a candidate gene for alcohol-induced developmental disorders
    A Pauliina, V Jussi, M Heidi, M Vijayachitra, S Joonas, W Essi, R Karit, ...
    BMC Medicine 2022

  • The expression pattern of endometrial receptivity genes is desynchronized between endometrium and matched endometriomas
    M Saare, A Lawarde, V Modhukur, I Mikeltadze, H Karro, A Minajeva, ...
    Reproductive BioMedicine Online 45 (4), 713-720 2022

  • Chromatin remodeler developmental pluripotency associated factor 4 (DPPA4) is a candidate gene for alcohol-induced developmental disorders
    P Auvinen, J Vehvilinen, H Marjonen, V Modhukur, J Sokka, E Walln, ...
    medRxiv, 2022.04. 14.22273502 2022

  • Uterine fluid microRNAs are dysregulated in women with recurrent implantation failure
    C von Grothusen, C Frisendahl, V Modhukur, PG Lalitkumar, M Peters, ...
    Human Reproduction 37 (4), 734-746 2022

  • Increased risk of Graves ophthalmopathy in patients with increasing TRAb after radioiodine treatment and the impact of CTLA4 on TRAb titres
    B Shahida, K Tsoumani, T Planck, V Modhukur, P Asp, A Sundlv, ...
    Endocrine 75 (3), 856-864 2022

  • Machine Learning Approaches to Classify Primary and Metastatic Cancers Using Tissue of Origin-Based DNA Methylation Profiles
    V Modhukur, S Sharma, M Mondal, A Lawarde, K Kask, R Sharma, ...
    Cancers 13 (15), 16 2021

  • Profiling of DNA methylation patterns as biomarkers of human disease
    V Modhukur
    Institute of Computer Science, University of Tartu 2019

MOST CITED SCHOLAR PUBLICATIONS

  • MethSurv: a web tool to perform multivariable survival analysis using DNA methylation data.
    V Modhukur, T , Iljasenko, T Metsalu, K Lokk, J Laisk-Podar, Triin and Vilo
    Epigenomics 2018
    Citations: 449

  • DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns
    K Lokk, V Modhukur, B Rajashekar, K Mrtens, R Mgi, R Kolde, ...
    Genome Biology 15 (4) 2014
    Citations: 437

  • The influence of menstrual cycle and endometriosis on endometrial methylome
    S Merli, M Vijayachitra, S Marina, R Balaji, R Kadri, S Denissa, K Helle, ...
    Clinical Epigenetics 8 (2), 1-10 2016
    Citations: 69

  • Glycosyltransferase functions of E. coli O-antigens
    M Lundborg, V Modhukur, G Widmalm
    Glycobiology 20 (3), 366-368 2010
    Citations: 49

  • DNA methylation changes in endometrium and correlation with gene expression during the transition from pre-receptive to receptive phase
    V Kukushkina, V Modhukur, M Suhorutšenko, M Peters, R Mgi, ...
    Scientific reports 7 (1), 3916 2017
    Citations: 43

  • Uterine fluid microRNAs are dysregulated in women with recurrent implantation failure
    C von Grothusen, C Frisendahl, V Modhukur, PG Lalitkumar, M Peters, ...
    Human Reproduction 37 (4), 734-746 2022
    Citations: 38

  • Machine Learning Approaches to Classify Primary and Metastatic Cancers Using Tissue of Origin-Based DNA Methylation Profiles
    V Modhukur, S Sharma, M Mondal, A Lawarde, K Kask, R Sharma, ...
    Cancers 13 (15), 16 2021
    Citations: 27

  • MethSurv: a web tool to perform multivariable survival analysis using DNA methylation data. Epigenomics 10, 277–288
    V Modhukur, T Iljasenko, T Metsalu, K Lokk, T Laisk-Podar, J Vilo
    2018
    Citations: 22

  • Chromatin modifier developmental pluripotency associated factor 4 (DPPA4) is a candidate gene for alcohol-induced developmental disorders
    A Pauliina, V Jussi, M Heidi, M Vijayachitra, S Joonas, W Essi, R Karit, ...
    BMC Medicine 2022
    Citations: 8

  • Erratum to: DNA methylome profiling of human tissues identifies global and tissue-specific methylation patterns
    K Lokk, V Modhukur, B Rajashekar, K Mrtens, R Mgi, R Kolde, ...
    Genome biology 17 2016
    Citations: 8

  • Next Generation Sequencing Analysis of Lung Cancer Datasets: A Functional Genomics Perspective
    P Pappu, D Madduru, M Chandrasekharan, V Modhukur, S Nallapeta, ...
    Indian Journal of Cancer 53 (1), 1-7 2016
    Citations: 7

  • ExplORRNet: An interactive web tool to explore stage-wise miRNA expression profiles and their interactions with mRNA and lncRNA in human breast and gynecological cancers
    A Lawarde, ES Rahmani, A Nath, D Lavogina, J Jaal, A Salumets, ...
    Non-coding RNA Research 9 (1), 125-140 2024
    Citations: 5

  • Increased risk of Graves ophthalmopathy in patients with increasing TRAb after radioiodine treatment and the impact of CTLA4 on TRAb titres
    B Shahida, K Tsoumani, T Planck, V Modhukur, P Asp, A Sundlv, ...
    Endocrine 75 (3), 856-864 2022
    Citations: 5

  • Exploring immunome and microbiome interplay in reproductive health: current knowledge, challenges, and novel diagnostic tools
    P Lingasamy, V Modhukur, R Mndar, A Salumets
    Seminars in Reproductive Medicine 2024
    Citations: 4

  • Users’ Concerns About Endometriosis on Social Media: Sentiment Analysis and Topic Modeling Study
    R Goel, V Modhukur, K Tr, A Salumets, R Sharma, M Peters
    Journal of Medical Internet Research 2023
    Citations: 4

  • MBMethPred: A Computational Framework for the Accurate Classification of Childhood Medulloblastoma Subgroups Using Data Integration and AI-Based Approaches
    E Sharif Rahmani, A Lawarde, P Lingasamy, S Vela Moreno, A Salumets, ...
    Frontiers in Genetics 14 2023
    Citations: 3

  • Profiling of DNA methylation patterns as biomarkers of human disease
    V Modhukur
    Institute of Computer Science, University of Tartu 2019
    Citations: 3

  • Inhibition of epigenetic and cell cycle-related targets in glioblastoma cell lines reveals that onametostat reduces proliferation and viability in both normoxic and hypoxic
    D Lavogina, MK Krlov, H Vellama, V Modhukur, V Di Nisio, H Lust, ...
    Scientific Reports 14 (1), 4303 2024
    Citations: 2

  • The expression pattern of endometrial receptivity genes is desynchronized between endometrium and matched endometriomas
    M Saare, A Lawarde, V Modhukur, I Mikeltadze, H Karro, A Minajeva, ...
    Reproductive BioMedicine Online 45 (4), 713-720 2022
    Citations: 2

  • Stanniocalcin protein expression in female reproductive organs: literature review and public cancer database analysis
    M Khatun, V Modhukur, TT Piltonen, JS Tapanainen, A Salumets
    Endocrinology 165 (10), bqae110 2024
    Citations: 1